WormBase Tree Display for Variation: WBVar02139035
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WBVar02139035 | Evidence | Paper_evidence | WBPaper00045317 | |||
---|---|---|---|---|---|---|
Name | Public_name | h13633 | ||||
Other_name | F56B6.2h.1:c.1711+1128G>A | |||||
F56B6.2j.1:c.1705+1128G>A | ||||||
F56B6.2e.1:c.211+1128G>A | ||||||
F56B6.2c.1:c.511+1128G>A | ||||||
F56B6.2i.1:c.1702+1128G>A | ||||||
F56B6.2b.1:c.1585+1128G>A | ||||||
F56B6.2a.1:c.1696+1128G>A | ||||||
HGVSg | CHROMOSOME_X:g.3551399G>A | |||||
Sequence_details | SMap | S_parent | Sequence | F56B6 | ||
Flanking_sequences | TTATCAGAGAGCCCTCGGTTTATGGAAACAGTGTGAGGTG | AAGTGATGCCTAGCCGTCAACCAAAATTGTTTATGAAGCC | ||||
Mapping_target | CHROMOSOME_X | |||||
Source_location | 200 | CHROMOSOME_X | 3551387 | 3551387 | ||
Type_of_mutation | Substitution | G | A | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023740 | |||||
Laboratory | KR | |||||
Analysis | WGS_Rose | |||||
Status | Live | |||||
Affects | Gene | WBGene00004350 | ||||
Transcript | F56B6.2j.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | F56B6.2j.1:c.1705+1128G>A | |||||
Intron_number | 9/14 | |||||
F56B6.2e.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F56B6.2e.1:c.211+1128G>A | |||||
Intron_number | 1/7 | |||||
F56B6.2i.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F56B6.2i.1:c.1702+1128G>A | |||||
Intron_number | 10/16 | |||||
F56B6.2b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F56B6.2b.1:c.1585+1128G>A | |||||
Intron_number | 9/15 | |||||
F56B6.2a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F56B6.2a.1:c.1696+1128G>A | |||||
Intron_number | 10/16 | |||||
F56B6.2h.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F56B6.2h.1:c.1711+1128G>A | |||||
Intron_number | 10/16 | |||||
F56B6.2c.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F56B6.2c.1:c.511+1128G>A | |||||
Intron_number | 4/9 | |||||
Reference | WBPaper00040589 | |||||
WBPaper00000975 | ||||||
WBPaper00003985 | ||||||
WBPaper00000699 | ||||||
WBPaper00045317 | ||||||
Method | WGS_Rose |