WormBase Tree Display for Variation: WBVar02139036
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WBVar02139036 | Evidence | Paper_evidence | WBPaper00045317 | |||
---|---|---|---|---|---|---|
Name | Public_name | h15015 | ||||
Other_name | F56B6.2b.1:c.1826+612T>C | |||||
F56B6.2i.1:c.1943+612T>C | ||||||
F56B6.2e.1:c.452+612T>C | ||||||
F56B6.2j.1:c.1946+612T>C | ||||||
F56B6.2h.1:c.1952+612T>C | ||||||
F56B6.2c.1:c.752+612T>C | ||||||
F56B6.2a.1:c.1937+612T>C | ||||||
HGVSg | CHROMOSOME_X:g.3553538T>C | |||||
Sequence_details | SMap | S_parent | Sequence | F56B6 | ||
Flanking_sequences | AAAAATTGGCAACGAAATGAAGTCATGATTTTTATTTTGG | AGAACTTAGTGGTTTCTTTTGTTCATTAGTATGTTGTTAT | ||||
Mapping_target | CHROMOSOME_X | |||||
Source_location | 200 | CHROMOSOME_X | 3553526 | 3553526 | ||
Type_of_mutation | Substitution | T | C | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023767 | |||||
Laboratory | KR | |||||
Analysis | WGS_Rose | |||||
Status | Live | |||||
Affects | Gene | WBGene00004350 | ||||
Transcript | F56B6.2j.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | F56B6.2j.1:c.1946+612T>C | |||||
Intron_number | 11/14 | |||||
F56B6.2e.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F56B6.2e.1:c.452+612T>C | |||||
Intron_number | 3/7 | |||||
F56B6.2i.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F56B6.2i.1:c.1943+612T>C | |||||
Intron_number | 12/16 | |||||
F56B6.2b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F56B6.2b.1:c.1826+612T>C | |||||
Intron_number | 11/15 | |||||
F56B6.2a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F56B6.2a.1:c.1937+612T>C | |||||
Intron_number | 12/16 | |||||
F56B6.2h.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F56B6.2h.1:c.1952+612T>C | |||||
Intron_number | 12/16 | |||||
F56B6.2c.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F56B6.2c.1:c.752+612T>C | |||||
Intron_number | 6/9 | |||||
Reference (5) | ||||||
Method | WGS_Rose |