WormBase Tree Display for Variation: WBVar02145406
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| WBVar02145406 | Evidence | Paper_evidence | WBPaper00045755 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | dz182 | |||||
| Other_name | CE17653:p.Trp458Ter | ||||||
| F11A6.1a.1:c.1373_1374delinsAA | |||||||
| F11A6.1a.2:c.1373_1374delinsAA | |||||||
| HGVSg | CHROMOSOME_I:g.11679253_11679254delinsAA | ||||||
| Sequence_details | SMap | S_parent | Sequence | F11A6 | |||
| Flanking_sequences | ttgctctagaagccaacccgaatctcacgt | cgagaccttcaacatattgtgatacgaact | |||||
| Mapping_target | F11A6 | ||||||
| Type_of_mutation | Substitution | gg | rr | Paper_evidence | WBPaper00045755 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | EB | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00002232 | |||||
| Transcript | F11A6.1a.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | F11A6.1a.1:c.1373_1374delinsAA | ||||||
| HGVSp | CE17653:p.Trp458Ter | ||||||
| cDNA_position | 1473-1474 | ||||||
| CDS_position | 1373-1374 | ||||||
| Protein_position | 458 | ||||||
| Exon_number | 5/9 | ||||||
| Codon_change | tGG/tAA | ||||||
| Amino_acid_change | W/* | ||||||
| F11A6.1a.2 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | F11A6.1a.2:c.1373_1374delinsAA | ||||||
| HGVSp | CE17653:p.Trp458Ter | ||||||
| cDNA_position | 1477-1478 | ||||||
| CDS_position | 1373-1374 | ||||||
| Protein_position | 458 | ||||||
| Exon_number | 5/9 | ||||||
| Codon_change | tGG/tAA | ||||||
| Amino_acid_change | W/* | ||||||
| Genetics | Interpolated_map_position | I | 9.53965 | ||||
| Description | Phenotype | WBPhenotype:0000882 | Paper_evidence | WBPaper00045755 | |||
| Curator_confirmed | WBPerson18979 | ||||||
| Reference | WBPaper00045755 | ||||||
| Method | Substitution_allele |
