WormBase Tree Display for Expression_cluster: WBPaper00060445:ikb-1(nr2027)_downregulated_L1
expand all nodes | collapse all nodes | view schema
| WBPaper00060445:ikb-1(nr2027)_downregulated_L1 | Description | Transcripts that showed significantly decreased expression in ikb-1(nr2027) animals at L1 larva stage, comparing to in N2 animals. | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | Differentially expressed genes between wild type and knockouts were explored using DESeq2 R package (v.1.20.0) considering a threshold of adjusted p value < 0.01. | ||
| Reference | WBPaper00060445 | ||
| Based_on_WB_Release | 235 | ||
| Gene | WBGene00021089 | log2FoldChange: -0.887846798613248, p-value: 0.064553756634455, padj: 0.999966295047132 | |
| WBGene00007174 | log2FoldChange: -1.23394237438132, p-value: 0.011236195538525, padj: 0.999966295047132 | ||
| WBGene00003842 | log2FoldChange: -1.11431481788895, p-value: 0.015883408578029, padj: 0.999966295047132 | ||
| WBGene00022801 | log2FoldChange: -0.66173725883477, p-value: 0.06371779460112, padj: 0.999966295047132 | ||
| WBGene00009514 | log2FoldChange: -0.960017139219684, p-value: 0.003590804264549, padj: 0.999966295047132 | ||
| WBGene00020201 | log2FoldChange: -5.61777331699405, p-value: 0.021905486208429, padj: 0.999966295047132 | ||
| WBGene00012939 | log2FoldChange: -0.698974403372622, p-value: 0.0914741430927, padj: 0.999966295047132 | ||
| WBGene00013427 | log2FoldChange: -2.56668675845641, p-value: 0.054531887961109, padj: 0.999966295047132 | ||
| WBGene00008484 | log2FoldChange: -0.948874308086086, p-value: 0.012264701690322, padj: 0.999966295047132 | ||
| WBGene00000687 | log2FoldChange: -0.74415109328575, p-value: 0.038230950954578, padj: 0.999966295047132 | ||
| WBGene00022547 | log2FoldChange: -2.98349426903932, p-value: 0.000610402521542, padj: 0.473956775025311 | ||
| WBGene00020569 | log2FoldChange: -0.880121373518409, p-value: 0.087092382895414, padj: 0.999966295047132 | ||
| WBGene00022649 | log2FoldChange: -0.797692502822408, p-value: 0.084888718160579, padj: 0.999966295047132 | ||
| WBGene00007368 | log2FoldChange: -0.712711647370379, p-value: 0.046530265758943, padj: 0.999966295047132 | ||
| WBGene00001430 | log2FoldChange: -0.781201922220445, p-value: 0.082233738833819, padj: 0.999966295047132 | ||
| WBGene00007438 | log2FoldChange: -3.83554631675409, p-value: 0.020227545692115, padj: 0.999966295047132 | ||
| WBGene00008892 | log2FoldChange: -6.47089603640443, p-value: 0.00587305481112, padj: 0.999966295047132 | ||
| WBGene00010064 | log2FoldChange: -0.72556253434117, p-value: 0.079529827352023, padj: 0.999966295047132 | ||
| WBGene00086568 | log2FoldChange: -1.19899354084966, p-value: 0.060319891307326, padj: 0.999966295047132 | ||
| WBGene00003837 | log2FoldChange: -1.10401831711108, p-value: 0.014212799357417, padj: 0.999966295047132 | ||
| WBGene00006979 | log2FoldChange: -5.65447219207227, p-value: 0.050253631307549, padj: 0.999966295047132 | ||
| WBGene00005763 | log2FoldChange: -1.82471852166549, p-value: 0.083298929885325, padj: 0.999966295047132 | ||
| WBGene00015004 | log2FoldChange: -0.870418654023658, p-value: 0.059157499514481, padj: 0.999966295047132 | ||
| WBGene00007140 | log2FoldChange: -1.90361661839312, p-value: 0.025735883001419, padj: 0.999966295047132 | ||
| WBGene00013726 | log2FoldChange: -1.1699628084809, p-value: 0.068527725462001, padj: 0.999966295047132 | ||
| WBGene00019153 | log2FoldChange: -3.39063748084018, p-value: 8.81949132312958E-05, padj: 0.114929028906629 | ||
| WBGene00015993 | log2FoldChange: -1.57043848173898, p-value: 0.000107088987861, padj: 0.121926167129538 | ||
| WBGene00000714 | log2FoldChange: -2.92284611085694, p-value: 0.049474938575775, padj: 0.999966295047132 | ||
| WBGene00003991 | log2FoldChange: -0.903220224720808, p-value: 0.031656377315243, padj: 0.999966295047132 | ||
| WBGene00005261 | log2FoldChange: -2.39607148616278, p-value: 0.066772265367821, padj: 0.999966295047132 | ||
| WBGene00017839 | log2FoldChange: -3.2459336184307, p-value: 0.027091356908339, padj: 0.999966295047132 | ||
| WBGene00008042 | log2FoldChange: -1.00714772100832, p-value: 0.076982202660955, padj: 0.999966295047132 | ||
| WBGene00015841 | log2FoldChange: -1.2868513382316, p-value: 0.015564903533797, padj: 0.999966295047132 | ||
| WBGene00008961 | log2FoldChange: -0.815377918823329, p-value: 0.068971306512383, padj: 0.999966295047132 | ||
| WBGene00020386 | log2FoldChange: -2.90747629991338, p-value: 0.024840396654599, padj: 0.999966295047132 | ||
| WBGene00018031 | log2FoldChange: -0.715344929171852, p-value: 0.07447713015717, padj: 0.999966295047132 | ||
| WBGene00015367 | log2FoldChange: -3.23779497587288, p-value: 0.07716179112124, padj: 0.999966295047132 | ||
| WBGene00001460 | log2FoldChange: -0.653225624990593, p-value: 0.04911412832597, padj: 0.999966295047132 | ||
| WBGene00005538 | log2FoldChange: -1.64704633940287, p-value: 0.086912947158164, padj: 0.999966295047132 | ||
| WBGene00010407 | log2FoldChange: -0.866182845414316, p-value: 0.010735941586246, padj: 0.999966295047132 | ||
| WBGene00017959 | log2FoldChange: -2.23381942605402, p-value: 0.012324168235197, padj: 0.999966295047132 | ||
| WBGene00019152 | log2FoldChange: -1.59649796147845, p-value: 0.046762884711716, padj: 0.999966295047132 | ||
| WBGene00010133 | log2FoldChange: -0.773266701087228, p-value: 0.044671405778875, padj: 0.999966295047132 | ||
| WBGene00015355 | log2FoldChange: -2.88636810732317, p-value: 0.000872007614893, padj: 0.600595977002993 | ||
| WBGene00008009 | log2FoldChange: -3.11208340652852, p-value: 0.039464838705173, padj: 0.999966295047132 | ||
| WBGene00019268 | log2FoldChange: -0.704005626525896, p-value: 0.098063797416416, padj: 0.999966295047132 | ||
| WBGene00005810 | log2FoldChange: -2.29368060037845, p-value: 0.070827743796621, padj: 0.999966295047132 | ||
| WBGene00021479 | log2FoldChange: -1.23429363120661, p-value: 0.081980179522366, padj: 0.999966295047132 | ||
| WBGene00017331 | log2FoldChange: -1.68172603452297, p-value: 2.49641972491135E-05, padj: 0.04372767196612 | ||
| WBGene00010004 | log2FoldChange: -0.902841661168115, p-value: 0.096385283491671, padj: 0.999966295047132 | ||
| WBGene00019184 | log2FoldChange: -0.90152332234598, p-value: 0.058672446119394, padj: 0.999966295047132 | ||
| WBGene00021722 | log2FoldChange: -1.60968424044487, p-value: 0.069383670561734, padj: 0.999966295047132 | ||
| WBGene00021582 | log2FoldChange: -0.900300777139032, p-value: 0.086062160397987, padj: 0.999966295047132 | ||
| WBGene00009642 | log2FoldChange: -0.825961693180678, p-value: 0.014083902406129, padj: 0.999966295047132 | ||
| WBGene00001695 | log2FoldChange: -2.46825312817666, p-value: 0.004241097933934, padj: 0.999966295047132 | ||
| WBGene00003542 | log2FoldChange: -1.48043226214416, p-value: 0.098477019677593, padj: 0.999966295047132 | ||
| WBGene00020343 | log2FoldChange: -0.733427811285007, p-value: 0.046920444468066, padj: 0.999966295047132 | ||
| WBGene00011074 | log2FoldChange: -1.5876255508231, p-value: 0.007668999921518, padj: 0.999966295047132 | ||
| WBGene00001936 | log2FoldChange: -0.659664595582094, p-value: 0.057183180827163, padj: 0.999966295047132 | ||
| WBGene00017603 | log2FoldChange: -3.39034632064071, p-value: 0.089043079131333, padj: 0.999966295047132 | ||
| WBGene00005087 | log2FoldChange: -3.39748908159881, p-value: 0.068005158755425, padj: 0.999966295047132 | ||
| WBGene00004172 | log2FoldChange: -0.715395170738051, p-value: 0.046794334156184, padj: 0.999966295047132 | ||
| WBGene00011429 | log2FoldChange: -2.65893223081125, p-value: 9.08489974230083E-05, padj: 0.114929028906629 | ||
| WBGene00010501 | log2FoldChange: -1.01247807013509, p-value: 0.029653475851448, padj: 0.999966295047132 | ||
| WBGene00012062 | log2FoldChange: -1.81198251592367, p-value: 0.000106850360927, padj: 0.121926167129538 | ||
| WBGene00021120 | log2FoldChange: -3.34620443602257, p-value: 0.054827879585551, padj: 0.999966295047132 | ||
| WBGene00022571 | log2FoldChange: -1.32199103316386, p-value: 0.099211165490296, padj: 0.999966295047132 | ||
| WBGene00021195 | log2FoldChange: -1.93598936503338, p-value: 0.023607394912169, padj: 0.999966295047132 | ||
| WBGene00008186 | log2FoldChange: -2.3612171761446, p-value: 0.082020552500063, padj: 0.999966295047132 | ||
| WBGene00020878 | log2FoldChange: -2.97568260622772, p-value: 0.03181557034086, padj: 0.999966295047132 | ||
| WBGene00003862 | log2FoldChange: -5.06829707786966, p-value: 8.08810674558274E-16, padj: 9.20871393518323E-12 | ||
| WBGene00013753 | log2FoldChange: -1.75689067697687, p-value: 0.036656673990189, padj: 0.999966295047132 | ||
| WBGene00005296 | log2FoldChange: -1.71229619478814, p-value: 0.079287396204041, padj: 0.999966295047132 | ||
| WBGene00006534 | log2FoldChange: -0.880832594044157, p-value: 0.059947059373724, padj: 0.999966295047132 | ||
| WBGene00015427 | log2FoldChange: -0.643700666116589, p-value: 0.039193062094257, padj: 0.999966295047132 | ||
| WBGene00007278 | log2FoldChange: -1.16658037305114, p-value: 0.097721886163378, padj: 0.999966295047132 | ||
| WBGene00018204 | log2FoldChange: -0.717902541225897, p-value: 0.069267857625506, padj: 0.999966295047132 | ||
| WBGene00019843 | log2FoldChange: -0.683845616734655, p-value: 0.079119359593156, padj: 0.999966295047132 | ||
| WBGene00016217 | log2FoldChange: -0.561848853127556, p-value: 0.092103576903945, padj: 0.999966295047132 | ||
| WBGene00001782 | log2FoldChange: -1.15027344858784, p-value: 0.098237770091788, padj: 0.999966295047132 | ||
| WBGene00007083 | log2FoldChange: -2.30541723168355, p-value: 0.052501315807195, padj: 0.999966295047132 | ||
| WBGene00077439 | log2FoldChange: -1.64513671668294, p-value: 0.086182136048719, padj: 0.999966295047132 | ||
| WBGene00002112 | log2FoldChange: -0.935419105192165, p-value: 0.049271481338391, padj: 0.999966295047132 | ||
| WBGene00021957 | log2FoldChange: -2.53860621403888, p-value: 0.084156640420582, padj: 0.999966295047132 | ||
| WBGene00007469 | log2FoldChange: -3.67127469754583, p-value: 0.00028056437129, padj: 0.277770926027622 | ||
| WBGene00013008 | log2FoldChange: -0.820052076831348, p-value: 0.010571678724106, padj: 0.999966295047132 | ||
| WBGene00010799 | log2FoldChange: -5.00450196309036, p-value: 1.16285835606907E-13, padj: 8.82648254201626E-10 | ||
| WBGene00011267 | log2FoldChange: -1.1352645997133, p-value: 0.077243461628458, padj: 0.999966295047132 | ||
| WBGene00005149 | log2FoldChange: -0.876148280690348, p-value: 0.060889564742805, padj: 0.999966295047132 | ||
| WBGene00002211 | log2FoldChange: -4.31005684699613, p-value: 8.70630181722861E-05, padj: 0.114929028906629 | ||
| WBGene00003742 | log2FoldChange: -1.80521548616271, p-value: 0.079241185774747, padj: 0.999966295047132 | ||
| WBGene00018741 | log2FoldChange: -1.41775572081205, p-value: 0.078110460434155, padj: 0.999966295047132 | ||
| WBGene00011211 | log2FoldChange: -2.77498232359977, p-value: 0.086644474358978, padj: 0.999966295047132 | ||
| WBGene00016286 | log2FoldChange: -2.7400838858002, p-value: 0.007407925988943, padj: 0.999966295047132 | ||
| WBGene00006165 | log2FoldChange: -3.12385229701245, p-value: 0.084153804180164, padj: 0.999966295047132 | ||
| WBGene00021872 | log2FoldChange: -0.836862683795753, p-value: 0.004260096698458, padj: 0.999966295047132 | ||
| WBGene00020313 | log2FoldChange: -1.16672090630643, p-value: 0.031057031114446, padj: 0.999966295047132 | ||
| WBGene00015918 | log2FoldChange: -1.0395268934574, p-value: 0.073269696058879, padj: 0.999966295047132 | ||
| WBGene00077692 | log2FoldChange: -1.51858322905828, p-value: 0.012281412832451, padj: 0.999966295047132 | ||
| WBGene00019151 | log2FoldChange: -1.40366618004476, p-value: 0.06825685866519, padj: 0.999966295047132 | ||
| WBGene00002116 | log2FoldChange: -3.19973366582704, p-value: 0.001325825275102, padj: 0.795013262275987 | ||
| WBGene00021196 | log2FoldChange: -2.7748804740214, p-value: 0.084703044043607, padj: 0.999966295047132 | ||
| WBGene00012123 | log2FoldChange: -4.23594945136889, p-value: 2.41736594296426E-10, padj: 1.37614599718098E-06 | ||
| WBGene00000634 | log2FoldChange: -1.06482974972538, p-value: 0.086435302379921, padj: 0.999966295047132 | ||
| WBGene00011141 | log2FoldChange: -0.764095199260515, p-value: 0.025472898736487, padj: 0.999966295047132 | ||
| WBGene00000109 | log2FoldChange: -0.713712176188575, p-value: 0.067529011373256, padj: 0.999966295047132 | ||
| WBGene00001933 | log2FoldChange: -0.750965802520353, p-value: 0.028679274727136, padj: 0.999966295047132 | ||
| WBGene00001942 | log2FoldChange: -0.809009973423874, p-value: 0.061238418588581, padj: 0.999966295047132 | ||
| WBGene00022257 | log2FoldChange: -0.853507315803331, p-value: 0.072068843616456, padj: 0.999966295047132 | ||
| WBGene00007470 | log2FoldChange: -4.44561159160242, p-value: 0.000647880589783, padj: 0.475899642256584 | ||
| WBGene00007471 | log2FoldChange: -3.79580267606701, p-value: 0.002029869816387, padj: 0.999966295047132 | ||
| WBGene00007465 | log2FoldChange: -5.96776907841306, p-value: 8.97144629611084E-09, padj: 3.404813393479E-05 | ||
| WBGene00007467 | log2FoldChange: -3.12624103875895, p-value: 0.000184420238054, padj: 0.190883329123881 | ||
| WBGene00194674 | log2FoldChange: -3.95772574927196, p-value: 4.46579377283442E-05, padj: 0.072636135715152 | ||
| WBGene00000728 | log2FoldChange: -1.834089120055, p-value: 0.020351859557543, padj: 0.999966295047132 | ||
| WBGene00044697 | log2FoldChange: -2.87712771428036, p-value: 0.001625140552534, padj: 0.925151888043946 | ||
| WBGene00021450 | log2FoldChange: -1.79720781738111, p-value: 0.034161684394116, padj: 0.999966295047132 | ||
| WBGene00005829 | log2FoldChange: -2.24964270952574, p-value: 0.090225575861492, padj: 0.999966295047132 | ||
| WBGene00050579 | log2FoldChange: -4.88909038474422, p-value: 0.072651857782607, padj: 0.999966295047132 | ||
| WBGene00172258 | log2FoldChange: -4.98037921624489, p-value: 0.063079324273275, padj: 0.999966295047132 | ||
| WBGene00173715 | log2FoldChange: -4.12274004611971, p-value: 0.059321980159435, padj: 0.999966295047132 | ||
| WBGene00174488 | log2FoldChange: -5.28299109384646, p-value: 0.036301358910891, padj: 0.999966295047132 | ||
| WBGene00195065 | log2FoldChange: -2.09023224136211, p-value: 0.065792550246164, padj: 0.999966295047132 | ||
| WBGene00195613 | log2FoldChange: -3.15416520889809, p-value: 0.077240479354331, padj: 0.999966295047132 | ||
| WBGene00197664 | log2FoldChange: -1.59458010996781, p-value: 0.071184173920064, padj: 0.999966295047132 | ||
| WBGene00198692 | log2FoldChange: -5.06603840948863, p-value: 0.057315252991952, padj: 0.999966295047132 | ||
| WBGene00198798 | log2FoldChange: -2.96487098894948, p-value: 0.082344648093064, padj: 0.999966295047132 | ||
| WBGene00199640 | log2FoldChange: -4.93147924860692, p-value: 0.077138228079959, padj: 0.999966295047132 | ||
| WBGene00201425 | log2FoldChange: -5.09521653026416, p-value: 0.056342437929741, padj: 0.999966295047132 | ||
| WBGene00219976 | log2FoldChange: -0.753640365747363, p-value: 0.088761546026973, padj: 0.999966295047132 | ||
| WBGene00235086 | log2FoldChange: -3.47852698110687, p-value: 4.11756852942821E-06, padj: 0.009376115298361 | ||
| WBGene00000033 | log2FoldChange: -0.842388526988241, p-value: 0.023870066232424, padj: 0.999966295047132 | ||
| WBGene00016288 | log2FoldChange: -4.06279432320902, p-value: 0.042522331242385, padj: 0.999966295047132 | ||
| WBGene00000461 | log2FoldChange: -1.39553762674961, p-value: 0.023910143142959, padj: 0.999966295047132 | ||
| WBGene00016912 | log2FoldChange: -0.731309712895263, p-value: 0.07948119410736, padj: 0.999966295047132 | ||
| WBGene00000699 | log2FoldChange: -0.969597479448781, p-value: 0.085616325115138, padj: 0.999966295047132 | ||
| WBGene00000727 | log2FoldChange: -1.47028840204016, p-value: 0.079682543715568, padj: 0.999966295047132 | ||
| WBGene00008425 | log2FoldChange: -0.540095991350739, p-value: 0.09446811714724, padj: 0.999966295047132 | ||
| WBGene00001935 | log2FoldChange: -0.671849129621567, p-value: 0.085047959052275, padj: 0.999966295047132 | ||
| WBGene00001938 | log2FoldChange: -1.41489399796872, p-value: 0.074987373352358, padj: 0.999966295047132 | ||
| WBGene00002069 | log2FoldChange: -4.49599211462682, p-value: 3.9879366428218E-31, padj: 9.08093052936952E-27 | ||
| WBGene00010508 | log2FoldChange: -1.70325192141034, p-value: 0.014249193238463, padj: 0.999966295047132 | ||
| WBGene00005643 | log2FoldChange: -1.40958714865131, p-value: 0.006975611871721, padj: 0.999966295047132 | ||
| Attribute_of | RNASeq | ||
| Regulation | Regulated_by_gene | WBGene00002069 | |
| Associated_with | Life_stage | WBls:0000024 |
