WormBase Tree Display for Expression_cluster: WBPaper00031477:Up_deps-1_vs_WT

WBPaper00031477:Up_deps-1_vs_WT Description: Genes upregulated in deps-1(bn124) relative to wild type.
  Species: Caenorhabditis elegans
  Algorithm: Confidence levels were determined using a z test performed in Excel followed by a correction for multiple testing in which the P-value was multiplied by 17,539 (the number of genes on the microarrays). After this correction, all genes with a fold change of >1.8-fold, P < 0.05 were selected for analysis.
  Reference: WBPaper00031477
  Microarray_results: SMD_W09B7.B deps-1/wt ratio: 11.6
    SMD_Y43F4A.3 deps-1/wt ratio: 8.4
    SMD_F11A6.2 deps-1/wt ratio: 6.5
    SMD_C38D9.2 deps-1/wt ratio: 5.7
    SMD_C07G3.9 deps-1/wt ratio: 4.7
    SMD_W09B7.C deps-1/wt ratio: 4.4
    SMD_W03G1.3 deps-1/wt ratio: 4.1
    SMD_C40A11.8 deps-1/wt ratio: 3.3
    SMD_K02B7.2 deps-1/wt ratio: 3.2
    SMD_K02B7.1 deps-1/wt ratio: 3.2
    SMD_C18D4.6 deps-1/wt ratio: 3.1
    SMD_K02E7.2 deps-1/wt ratio: 2.9
    SMD_F41G4.6 deps-1/wt ratio: 2.6
    SMD_T23G5.6 deps-1/wt ratio: 2.6
    SMD_F15D4.5 deps-1/wt ratio: 2.4
    SMD_K07E8.10 deps-1/wt ratio: 2.3
    SMD_C04C3.5 deps-1/wt ratio: 2.3
    SMD_ZC15.3 deps-1/wt ratio: 2.2
    SMD_K08D10.5 deps-1/wt ratio: 2.1
    SMD_C33H5.4 deps-1/wt ratio: 2.0
    SMD_D2045.2 deps-1/wt ratio: 2.0
    SMD_F37B12.4 deps-1/wt ratio: 2.0
    SMD_H04D03.3 deps-1/wt ratio: 1.9
    SMD_R03G8.2 deps-1/wt ratio: 1.9
    SMD_Y39A3C_84.B deps-1/wt ratio: 1.9
    SMD_C13B9.1 deps-1/wt ratio: 1.8
    SMD_C04F12.9 deps-1/wt ratio: 1.8
    SMD_F30B5.4 deps-1/wt ratio: 1.8
    SMD_Y55H10B.D deps-1/wt ratio: 1.8
    SMD_F57G4.3 deps-1/wt ratio: 1.8
    SMD_T03D3.5 deps-1/wt ratio: 1.8
    SMD_B0511.11 deps-1/wt ratio: 1.8
  Gene: WBGene00021107
    WBGene00012798
    WBGene00008681
    WBGene00008010
    WBGene00015577
    WBGene00021106
    WBGene00016550
    WBGene00016551
    WBGene00007675
    WBGene00304806
    WBGene00011964
    WBGene00008862
    WBGene00001119
    WBGene00013832
    WBGene00019529
    WBGene00002221
    WBGene00008422
    WBGene00011980
    WBGene00010364
    WBGene00004249
    WBGene00007303
    WBGene00017934
    WBGene00020183
    WBGene00015236
  Attribute_of: Microarray_experiment: WBPaper00031477:deps-1_vs_N2_1
      WBPaper00031477:deps-1_vs_N2_2
      WBPaper00031477:N2_vs_deps-1_1
      WBPaper00031477:N2_vs_deps-1_2
  Regulation: Regulated_by_gene: WBGene00022034
  Associated_with: Life_stage: WBls:0000041
    Anatomy_term: WBbt:0005178 Expressed
        Dissection
    WBProcess: WBbiopr:00000057
      WBbiopr:00000028