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WormBase Tree Display for Gene: WBGene00180595

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Name Class

WBGene00180595SMapS_parentSequenceCjap.Contig2793
IdentityVersion2
NameSequence_nameCJA25023
Molecular_nameCJA25023
CJA25023.1
JA58581
Public_nameCJA25023
SpeciesCaenorhabditis japonica
HistoryVersion_change122 Jan 2009 15:16:36WBPerson4055EventImportedfrom WASHU
229 Jul 2011 11:13:38WBPerson4055EventImportedAugustus import
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:0000004106.213From_analysis (3)
WBls:0000027210.536From_analysis (3)
WBls:0000038175.734From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
199.469From_analysis (2)
223.205From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:000004143.3529From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
71.5603From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
72.5648From_analysisRNASeq.japonica.WBls:0000041.control_mean
73.5328From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
74.6037From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
74.6518From_analysisRNASeq.japonica.WBls:0000041.control_median
74.6999From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
76.0393From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
76.8536From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
89.8763From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
WBls:000010176.0393From_analysisRNASeq.japonica.total_over_all_stages.control_median
99.7082From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00224520
00224521
00224522
OrthologWBGene00104585Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00117953Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00150020Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190073Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00024808Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00224112Brugia malayiFrom_analysisWormBase-Compara
WBGene00006914Caenorhabditis elegansFrom_analysisWormBase-Compara
CBOVI.g8573Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g6657Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14172Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g7039Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g7162Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g7848Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g12831Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g8606Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g28872Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g12940Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00088.g3984Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00263.g8085Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-vha-5Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g7551Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00052.g2640Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_16366Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_014710Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12466Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g14411Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40113100Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00059467Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00075032Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrIV_pilon.g11037Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00240694Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00280902Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00267550Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00289220Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00120256Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00131539Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00132495Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00133130Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00136401Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00212986Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable proton-transporting ATPase activity, rotational mechanism. Predicted to be involved in proton transmembrane transport. Predicted to be part of proton-transporting V-type ATPase, V0 domain. Is an ortholog of C. elegans vha-5. In C. elegans, vha-5 is involved in several processes, including collagen and cuticulin-based cuticle development; exosomal secretion; and multicellular organismal-level water homeostasis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA25023
Corresponding_transcriptCJA25023.1
Experimental_infoExpr_patternExpr1089971
Microarray_resultsGPL14145_CJA25023_3-62_0.895_1_A
MethodGene