WormBase Tree Display for Gene: WBGene00024915

WBGene00024915 SMap: S_parent: Sequence: cb25.fpc0039
  Identity: Version: 2
    Name: CGC_name: Cbr-col-111 From_analysis: Inferred_from_orthology
      Sequence_name: CBG01723
      Molecular_name: CBG01723
        CBG01723.1
        CBP41578
      Other_name: CBG_01723 Accession_evidence: NDB HE601298
      Public_name: Cbr-col-111
    DB_info: Database: NDB locus_tag CBG_01723
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:54 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-col-111
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    RNASeq_FPKM: WBls:0000002 48.4398 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        67.4402 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        76.3948 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        77.4861 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        23.0313 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        56.338 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        62.4173 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
      WBls:0000003 0.829268 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        1.44539 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        2.06151 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        1.81114 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        2.54263 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 2.42168 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        2.93924 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        3.4568 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        2.10781 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        2.20809 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        2.37213 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        2.5133 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
      WBls:0000024 (12)
      WBls:0000027 133.921 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        29.0408 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        305.093 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        67.6279 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        110.517 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        138.792 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        153.407 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 17.604 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 13.2524 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        179.795 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        40.6575 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        45.3184 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        49.9793 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        70.9211 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
      WBls:0000041 12.6981 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        2.73923 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        35.0249 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        4.13116 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        6.51421 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        8.89727 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        11.161 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        13.2037 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        13.4247 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        15.0048 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 12.9271 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        4.47562 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        6.86625 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        7.7789 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        8.24584 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        9.18135 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        3.63474 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        7.32258 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        7.47733 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 35.9351 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        9.18135 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        33.154 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        9.03931 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
    GO_annotation: 00128325
    Ortholog (27)
    Paralog: WBGene00023585 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00023757 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00023937 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00024063 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00024856 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00024907 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00024996 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00025015 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00025511 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00025555 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00025679 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00025742 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00025774 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00025934 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00025940 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00025941 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00025971 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00025972 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00025973 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00025974 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00026075 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00026213 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00026263 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00026288 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00026337 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00026396 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00026626 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00026670 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00026770 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00026909 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00026916 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027584 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027591 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027592 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027593 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027594 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027595 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027653 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027815 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027816 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027906 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027910 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027975 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00028025 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00028168 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00028198 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00028378 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00028455 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00028537 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00028944 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00028976 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00029164 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00029189 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00029220 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00029471 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00029472 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00029490 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00029500 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00029604 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00030018 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00030203 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00030515 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00030914 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00031005 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00031137 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00031138 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00031172 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00031198 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00031587 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00032009 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00032124 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00032165 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00032386 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00032387 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00032504 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00032962 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033001 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033263 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033265 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033309 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033415 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033489 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033498 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033515 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033655 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033839 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033907 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00034030 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00034031 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00034313 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00034489 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00034601 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00034701 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00034709 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00034918 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00035053 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00035285 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00035408 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00035545 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00035585 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00035663 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00035924 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00035925 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036074 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036075 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036116 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036210 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036227 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036328 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036353 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036416 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036535 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036558 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036586 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036589 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037039 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037040 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037131 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037227 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037280 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037305 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037709 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037710 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00038311 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00038312 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00038313 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00038571 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00038572 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00039133 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00039445 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00039648 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00039751 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00039820 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00040090 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00040092 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00040166 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00040434 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00040879 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00041078 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00041083 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00041484 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00041558 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00041588 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00041590 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00041602 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00041612 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00041641 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00041761 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00041771 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00041817 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00042265 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00042569 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00042838 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00042923 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00271601 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-111. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG01723
    Corresponding_CDS_history: CBG01723:bp194
      CBG01723:bp255
    Corresponding_transcript: CBG01723.1
    Other_sequence (17)
  Experimental_info: Expr_pattern: Expr1055344
    Microarray_results: GPL8303_CB6_WBGene00024915_A
      GPL14143_CBG01723_178-237_0.887_16_B
      GPL14143_CBG01723_487-546_0.926_2_A
      GPL14143_CBG01723_882-941_0.927_1_C
  Method: Gene