WormBase Tree Display for Gene: WBGene00062307

WBGene00062307 SMap: S_parent: Sequence: Crem_Contig36
  Identity: Version: 3
    Name: CGC_name: Cre-unc-108 From_analysis: Inferred_from_orthology
      Sequence_name: CRE23887
      Molecular_name: CRE23887
        CRE23887.1
        RP22660
      Other_name: cr01.sctg31.wum.16
      Public_name: Cre-unc-108
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:40 WBPerson2970 Name_change: CGC_name: Cre-unc-108
        3 03 Jul 2008 11:45:44 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE23887
                Other_name: cr01.sctg31.wum.16
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 202.93 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        213.043 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        223.156 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 134.663 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
        171.092 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
        212.979 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
        236.095 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
        243.245 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
        244.847 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
        256.406 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
        256.488 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
        258.134 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
        259.346 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
        259.983 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
        261.753 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
        264.919 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
        267.481 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
        268.929 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
        273.398 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
        275.19 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
        284.3 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
        289.996 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
        295.637 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
        295.961 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
        301.092 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
        301.212 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
        306.936 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
        308.703 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
        317.962 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
        323.389 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
        325.104 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
        329.281 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
        336.809 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
        340.266 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
        353.36 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
        354.908 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
        361.683 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
        362.367 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
        370.638 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
        371.872 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
        382.733 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
        384.53 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
        388.787 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
        397.62 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
        398.245 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
        402.324 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
        406.106 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
        424.35 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
        486.908 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
        638.903 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
        665.14 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
        720.651 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
        726.29 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
        781.305 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
        79.6267 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
        816.318 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
      WBls:0000027 249.185 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        279.021 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        300.108 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        321.194 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        360.25 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        36.2763 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 177.627 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        235.3 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        247.698 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        49.8838 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 168.854 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        171.103 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        177.439 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        178.154 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        178.869 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        179.672 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        183.129 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        198.637 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
      WBls:0000063 128.122 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        130.464 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
        131.768 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
        138.018 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
        143.082 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
        177.74 From_analysis: RNASeq.remanei.WBls:0000063.control_median
        180.786 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        212.398 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
        212.549 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        231.24 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
        239.907 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
        240.315 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
      WBls:0000101 186.215 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        190.883 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    GO_annotation: 00157710
      00157711
    Ortholog: WBGene00006833 Caenorhabditis elegans From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00033026 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00113195 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00160355 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00155474 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00224578 Brugia malayi From_analysis: WormBase-Compara
      WBGene00136292 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00237917 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g9307 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g565 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g4287 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g6907 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g1878 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g20433 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g13432 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g333 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g9840 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g16455 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00042.g2304 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-108 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold627.g6738 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00111.g4613 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_08188 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_002190 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05523 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g13928 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10164210 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g581 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00261323 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00294642 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00058671 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00062267 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00051868 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00052055 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00053313 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00054100 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00054441 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00054888 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00055231 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00055765 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00055782 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00057173 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00057294 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00058167 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00060170 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00060933 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00061078 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00061205 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00061326 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00062318 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00062767 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00063096 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00063170 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00063929 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00065405 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00065781 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00068981 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00069567 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00070111 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00074188 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00084270 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00086071 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00055815 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable GTP binding activity and GTPase activity. Is an ortholog of C. elegans unc-108. In C. elegans, unc-108 is involved in several processes, including dense core granule maturation; phagosome maturation involved in apoptotic cell clearance; and regulation of locomotion involved in locomotory behavior. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE23887
    Corresponding_transcript: CRE23887.1
    Other_sequence: EX916522.1
      FG618950.1
      Tcol_isotig08775
      CJC03260_1
      EY468665.1
      HCC02153_1
      SS01373
      JI178589.1
      GPC00534_1
      ES565736.1
      AYC02779_1
      HC03832
      EX911911.1
      GRC00104_1
      EX912407.1
      Hbac_isotig02254
      Dviv_isotig23404
      CR02216
      EX553984.1
      Tcol_isotig08776
      GR12348
      RS08801
      Y11881.2
      EX911289.1
      EX013853.1
      EX014331.1
      EX013511.1
      FC811087.1
      FG588662.1
      TS01165
      PPC05439_1
      RS09139
      SRC00876_1
      GR13731
      Oden_isotig15173
      TSC05508_1
      SSC00790_1
      GP03146
      ES413319.1
      ES739110.1
      DN152845.1
      PT00149
      FG349449.1
      HG12162
      EX010807.1
      CSC00153_1
      GP02586
      RSC04457_1
      GP03012
      CRC03323_1
      ES744103.1
      GP01063
      Oden_isotig15172
      CBC03575_1
      GO250341.1
      ES409464.1
      Acan_isotig12781
      BU087554.1
      EX010640.1
      XI03685
      EX013265.1
      Tcol_isotig27194
      JI212779.1
      PT01384
      GRC02965_1
      CJC03774_1
      GR14091
      TSC00245_1
      EX011842.1
      HC08979
      JI483332.1
      PTC00845_1
      FG355571.1
      Acan_isotig06114
      EX914257.1
      NAC00736_1
      HBC21442_1
      BUC00129_1
      ACC01676_1
      TS02892
      FD514392.1
      ES567031.1
      Name_isotig01070
      EX009830.1
      FG588117.1
      EX912208.1
      CGC00210_1
      GPC01589_1
      HBC02348_1
      EX553648.1
      ES414193.1
      Oden_isotig19898
      AE03997
      RSC01266_1
      SR00402
      EX916472.1
      CBC17677_1
      ES409602.1
      Acan_isotig06115
      BU665961.1
      XIC01385_1
      HBC06406_1
      EX558074.1
      ES560638.1
      FC816561.1
      PTC00955_1
      NB06618
      JI227489.1
      NBC00207_1
      HG03345
      CR12229
      HGC00788_1
      BU666299.1
      EX012684.1
      EX555614.1
      EX912363.1
  Experimental_info: Expr_pattern: Expr1095793
    Microarray_results: GPL14146_CRE23887_278-337_0.927_9_C
      GPL14146_CRE23887_485-544_0.962_1_B
      GPL14146_CRE23887_523-582_0.934_6_A
  Method: Gene