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WormBase Tree Display for Gene: WBGene00064707

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Name Class

WBGene00064707SMapS_parentSequenceCrem_Contig30
IdentityVersion3
NameCGC_nameCre-cpn-2From_analysisInferred_from_orthology
Sequence_nameCRE17902
Molecular_nameCRE17902
CRE17902.1
RP02905
Other_namecr01.sctg51.wum.92
Public_nameCre-cpn-2
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
229 Nov 2007 17:00:43WBPerson2970Name_changeCGC_nameCre-cpn-2
303 Jul 2008 11:46:00WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE17902
Other_namecr01.sctg51.wum.92
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcpn
RNASeq_FPKMWBls:000000411.3525From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
11.7626From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
12.1726From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:00000240.928516From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
1.04588From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
1.14614From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
11.7676From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
1.21046From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
1.24955From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
1.44529From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
15.4081From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
1.54547From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
1.72909From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
1.84044From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
1.88795From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
2.07062From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
2.10929From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
2.12417From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
2.37624From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
2.56924From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
2.64287From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
2.67306From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
2.70118From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
2.80877From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
2.93534From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
2.96913From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
2.9859From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
3.18489From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
3.30568From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
3.31285From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
3.38111From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
3.43811From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
3.48084From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
34.8732From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
3.6344From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
3.67791From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
3.72259From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
3.95958From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
3.98894From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
4.05557From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
4.34313From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
4.36517From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
4.55104From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
4.98103From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
5.31762From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
5.38631From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
5.55844From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
5.71899From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
6.60772From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
6.91187From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
7.02824From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
7.86111From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
8.20278From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
8.41397From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
9.44891From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
WBls:000002725.455From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
37.7006From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
43.8203From_analysisRNASeq.remanei.WBls:0000027.control_median
49.94From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
52.6232From_analysisRNASeq.remanei.WBls:0000027.control_mean
97.3971From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:000003829.1372From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
60.8313From_analysisRNASeq.remanei.WBls:0000038.control_mean
76.4317From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
76.925From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000412.15782From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
3.92935From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
4.41816From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
4.53421From_analysisRNASeq.remanei.WBls:0000041.control_mean
4.67105From_analysisRNASeq.remanei.WBls:0000041.control_median
4.92395From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
5.64864From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
6.12732From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:00000630From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
2.63397From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
3.60517From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
3.6067From_analysisRNASeq.remanei.WBls:0000063.control_mean
3.68761From_analysisRNASeq.remanei.WBls:0000063.control_median
3.77005From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
5.82415From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
5.94482From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
6.1021From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
8.18671From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
WBls:000010118.4532From_analysisRNASeq.remanei.total_over_all_stages.control_mean
5.88448From_analysisRNASeq.remanei.total_over_all_stages.control_median
OrthologWBGene00000777Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000778Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00000779Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000780Caenorhabditis elegansFrom_analysisTreeFam
WBGene00029225Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00162625Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00148319Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00122476Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00178953Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00159661Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00131242Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00163191Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00128399Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00157878Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00153291Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00123334Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00223281Brugia malayiFrom_analysisWormBase-Compara
WBGene00248048Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00108049Pristionchus pacificusFrom_analysisWormBase-Compara
CBOVI.g7174Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g286Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g21314Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g18321Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17504Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25608Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g875Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g8426Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g28510Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g22512Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00630.g12977Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-cpn-2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold605.g5606Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00467.g11758Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_14341Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_008142Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02033Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g18996Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20002100Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g3093Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00267635Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00285365Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00056029Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00060094Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00062365Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00051281Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00052222Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00056204Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00056433Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Calponin family repeat; Calponin repeat; Smooth muscle protein/calponin; CH domain superfamily; Calponin homology domain; and Calponin homology (CH) domain. Is an ortholog of C. elegans cpn-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE17902
Corresponding_transcriptCRE17902.1
Other_sequenceJI212853.1
Oden_isotig07250
ACC03235_1
Oden_isotig07249
TSC10312_1
MJC00545_1
Name_isotig00604
ES570851.1
Acan_isotig11353
Oden_isotig07254
HBC04773_1
JI474885.1
Oden_isotig07251
EX010145.1
Name_isotig00603
BUC00870_1
CB039043.1
PPC17229_1
TDC00544_1
Oden_isotig07253
MJ01043
Oden_isotig07252
CJC00608_1
EX010589.1
MH09917
MHC07738_1
ES741882.1
EX911755.1
Dviv_isotig23264
Tcir_isotig07995
FF681376.1
Oden_isotig07255
Name_isotig08749
Hbac_isotig03334
Experimental_infoExpr_patternExpr1093775
Microarray_resultsGPL14146_CRE17902_151-210_0.922_5_B
GPL14146_CRE17902_490-549_0.930_3_C
GPL14146_CRE17902_549-608_0.936_1_A
MethodGene