WormBase Tree Display for Variation: WBVar01914169
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WBVar01914169 | Name | Public_name | WBVar01914169 | |||||
---|---|---|---|---|---|---|---|---|
Other_name (11) | ||||||||
HGVSg | CHROMOSOME_V:g.20898034A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F25C8 | ||||
Flanking_sequences | GATTAGCGAAACAATTATTATTTTAGCCAA | TCGTACTCCAAATCGTCGATCGACAGAAGC | ||||||
Mapping_target | F25C8 | |||||||
Source_location | 225 | CHROMOSOME_V | 20898003 | 20898003 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006812 | ||||||
Transcript | F25C8.3d.1 (12) | |||||||
F25C8.3b.1 (12) | ||||||||
F25C8.3e.1 (12) | ||||||||
F25C8.3c.1 | VEP_consequence | missense_variant | ||||||
VEP_impact | MODERATE | |||||||
SIFT | 0.03 | deleterious | ||||||
PolyPhen | 0.447 | benign | ||||||
HGVSc | F25C8.3c.1:c.9428A>T | |||||||
HGVSp | CE47217:p.Asn3143Ile | |||||||
cDNA_position | 9428 | |||||||
CDS_position | 9428 | |||||||
Protein_position | 3143 | |||||||
Exon_number | 34/35 | |||||||
Codon_change | aAt/aTt | |||||||
Amino_acid_change | N/I | |||||||
F25C8.3a.1 (12) | ||||||||
Method | WGS_Flibotte |