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WormBase Tree Display for Gene: WBGene00024808

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Name Class

WBGene00024808SMapS_parentSequencecb25.fpc0039
Identity (6)
Gene_infoBiotypeSO:0001217
Gene_classvha
RNASeq_FPKMWBls:000000250.8451From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
56.2453From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
58.9281From_analysisRNASeq.briggsae.WBls:0000002.control_mean
69.694From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
26.4359From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
50.8051From_analysisRNASeq.briggsae.WBls:0000002.control_mean
53.5452From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
3.94208From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
7.88415From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
4.8538From_analysisRNASeq.briggsae.WBls:0000003.control_mean
6.67725From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000463.7593From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
64.4486From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
65.1379From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
62.4944From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
63.9046From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
64.3694From_analysisRNASeq.briggsae.WBls:0000004.control_mean
66.551From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002713.8975From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
156.873From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
41.905From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
70.8918From_analysisRNASeq.briggsae.WBls:0000027.control_mean
59.4236From_analysisRNASeq.briggsae.WBls:0000027.control_median
72.4044From_analysisRNASeq.briggsae.WBls:0000027.control_mean
76.9422From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035135.167From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038101.416From_analysisRNASeq.briggsae.WBls:0000038.control_mean
154.706From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
74.2763From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
81.1924From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
88.3404From_analysisRNASeq.briggsae.WBls:0000038.control_median
95.4884From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004134.0416From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
42.5054From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
47.5694From_analysisRNASeq.briggsae.WBls:0000041.control_median
52.6334From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
53.7768From_analysisRNASeq.briggsae.WBls:0000041.control_mean
85.9267From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
37.4151From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
53.9568From_analysisRNASeq.briggsae.WBls:0000041.control_mean
71.2189From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006332.6064From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
35.4468From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
36.8986From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
37.4076From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
39.3579From_analysisRNASeq.briggsae.WBls:0000063.control_mean
54.4299From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
37.1531From_analysisRNASeq.briggsae.WBls:0000063.control_median
43.4852From_analysisRNASeq.briggsae.WBls:0000063.control_mean
64.1221From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010156.2453From_analysisRNASeq.briggsae.total_over_all_stages.control_median
69.0382From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
63.1269From_analysisRNASeq.briggsae.total_over_all_stages.control_median
65.2071From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00128196
00128197
00128198
00128199
Ortholog (36)
ParalogWBGene00025861Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026344Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029076Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable proton-transporting ATPase activity, rotational mechanism. Predicted to be involved in proton transmembrane transport. Predicted to be part of vacuolar proton-transporting V-type ATPase, V0 domain. Is an ortholog of C. elegans vha-5. In C. elegans, vha-5 is involved in several processes, including collagen and cuticulin-based cuticle development; exosomal secretion; and multicellular organismal-level water homeostasis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG01592
Corresponding_CDS_historyCBG01592:bp194
CBG01592:bp255
Corresponding_transcriptCBG01592.1
Other_sequenceJI171416.1
FC551915.1
CB038678.1
EX544860.1
MI00077
ES568051.1
XI03319
CBC07937_1
HBC20789_1
EX536391.1
EX538043.1
EX563896.1
Name_isotig06635
JI176799.1
EX540297.1
MI04066
RS06721
FC812089.1
FC817697.1
RSC02084_1
TS00129
EY462348.1
FC554741.1
NBC04689_1
Dviv_isotig25468
BF400297.1
MIC02622_1
MA00205
XIC02850_1
FC817547.1
MH09920
Dviv_isotig28706
EX551139.1
SR02919
XIC04047_1
ACC05416_1
PTC01014_1
MAC01055_1
TDC00766_1
ACC33439_1
FC542280.1
MHC01117_1
EX540327.1
ACC36963_1
Oden_isotig10845
SRC02400_1
CBC05333_1
FC551172.1
XI05465
EY464467.1
Dviv_isotig10998
Tcir_isotig23909
BXC04441_1
MH03795
Oden_isotig10844
Hbac_isotig01299
FG974923.1
EX536033.1
Acan_isotig22328
RS06720
Acan_isotig18969
FC817762.1
HBC11531_1
MJ04263
ACC10304_1
AA294090.1
Acan_isotig08091
FC812149.1
FG980392.1
Name_isotig01853
MI03859
ASC24020_1
MIC00892_1
GO252196.1
Tcol_isotig12008
OVC00975_1
MHC07739_1
TSC04253_1
JI220521.1
GR12672
EX536004.1
Tcol_isotig12009
Dviv_isotig10994
NB11409
FC811949.1
SRC04351_1
SRC02406_1
Dviv_isotig10996
PPC09481_1
FC545749.1
FC552423.1
FC551722.1
MJC03634_1
Tcir_isotig28531
AS08080
DN558311.1
ES411436.1
EY473821.1
EY466884.1
PT01196
Oden_isotig10843
GRC01675_1
CN007714.1
Name_isotig06927
LSC01124_1
Tcol_isotig26198
Tcir_isotig07880
ACC39068_1
EY460094.1
OVC08350_1
Tcir_isotig09732
EX547658.1
NB11408
Oden_isotig23558
NBC02228_1
SR00290
EX551925.1
Dviv_isotig10995
Experimental_infoExpr_patternExpr1066029
Microarray_resultsGPL8303_CB6_WBGene00024808_A
GPL8303_CB6_WBGene00024808_B
GPL14143_CBG01592_2079-2138_0.908_12_C
GPL14143_CBG01592_2272-2331_0.918_9_B
GPL14143_CBG01592_2586-2645_0.959_1_A
MethodGene