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WormBase Tree Display for Gene: WBGene00026344

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Name Class

WBGene00026344SMapS_parentSequencecb25.fpc0063
IdentityVersion2
NameCGC_nameCbr-vha-7From_analysisInferred_from_orthology
Sequence_nameCBG03483
Molecular_nameCBG03483a
CBG03483a.1
CBP48052
CBG03483b
CBP48063
CBG03483b.1
Other_nameCBG_03483Accession_evidenceNDBHE601244
Public_nameCbr-vha-7
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:55WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-vha-7
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classvha
RNASeq_FPKMWBls:000000210.966From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
12.7066From_analysisRNASeq.briggsae.WBls:0000002.control_mean
12.874From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
14.2799From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
13.577From_analysisRNASeq.briggsae.WBls:0000002.control_median
14.8221From_analysisRNASeq.briggsae.WBls:0000002.control_mean
21.1683From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000031.73759From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.88597From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
2.03435From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
2.12903From_analysisRNASeq.briggsae.WBls:0000003.control_mean
2.61514From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000046.7896From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
7.32133From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
7.85306From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
6.84957From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
7.39119From_analysisRNASeq.briggsae.WBls:0000004.control_mean
7.56902From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
7.89472From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.515686From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
11.2964From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.79908From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.53706From_analysisRNASeq.briggsae.WBls:0000027.control_mean
12.6703From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
6.54774From_analysisRNASeq.briggsae.WBls:0000027.control_median
6.57037From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000357.80611From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.7081From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
10.9974From_analysisRNASeq.briggsae.WBls:0000038.control_mean
22.5261From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.93711From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
6.81839From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
8.76324From_analysisRNASeq.briggsae.WBls:0000038.control_median
WBls:000004115.7622From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
27.2958From_analysisRNASeq.briggsae.WBls:0000041.control_mean
29.5938From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
30.7491From_analysisRNASeq.briggsae.WBls:0000041.control_median
31.9045From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
31.9228From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
12.1938From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
15.5574From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
22.678From_analysisRNASeq.briggsae.WBls:0000041.control_median
22.8224From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:000006312.3308From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
13.4831From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
13.915From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
15.4379From_analysisRNASeq.briggsae.WBls:0000063.control_mean
15.7206From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
21.7402From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
14.2478From_analysisRNASeq.briggsae.WBls:0000063.control_median
14.5806From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
15.295From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010110.966From_analysisRNASeq.briggsae.total_over_all_stages.control_median
11.96From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
11.1312From_analysisRNASeq.briggsae.total_over_all_stages.control_median
11.7878From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00129869
00129870
00129871
00129872
Ortholog (35)
ParalogWBGene00024808Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00025861Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029076Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable proton-transporting ATPase activity, rotational mechanism. Predicted to be involved in proton transmembrane transport. Predicted to be part of vacuolar proton-transporting V-type ATPase, V0 domain. Is an ortholog of C. elegans vha-7.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG03483a
CBG03483b
Corresponding_CDS_historyCBG03483:bp194
CBG03483:bp258
Corresponding_transcriptCBG03483a.1
CBG03483b.1
Other_sequence (23)
Experimental_infoExpr_patternExpr1067157
Microarray_resultsGPL8303_CB6_WBGene00026344_A
GPL8303_CB6_WBGene00026344_B
GPL8303_CB6_WBGene00026344_C
GPL14143_CBG03483_3547-3606_0.830_81_C
GPL14143_CBG03483_3814-3873_0.922_12_B
GPL14143_CBG03483_4129-4188_0.909_16_A
MethodGene