Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00030186

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00030186SMapS_parentSequencecb25.fpc1570
IdentityVersion2
NameCGC_nameCbr-mec-3From_analysisInferred_from_orthology
Sequence_nameCBG08386
Molecular_nameCBG08386a
CBG08386a.1
CBP02049
CBG08386b
CBP30347
CBG08386b.1
Other_nameCBG_08386Accession_evidenceNDBHE601100
Public_nameCbr-mec-3
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-mec-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmec
AlleleWBVar00009927
WBVar00009912
WBVar00009897
WBVar00009932
WBVar00009917
WBVar00009902
WBVar00009922
WBVar00009892
WBVar00009907
RNASeq_FPKMWBls:00000023.23862From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
3.44863From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
3.56459From_analysisRNASeq.briggsae.WBls:0000002.control_mean
4.00652From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.17968From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
3.34363From_analysisRNASeq.briggsae.WBls:0000002.control_median
3.46836From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000038.86364From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
9.19035From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
9.51706From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
8.08026From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
8.82032From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000046.88729From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
7.97254From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
9.05778From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
5.81789From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
7.75574From_analysisRNASeq.briggsae.WBls:0000004.control_mean
8.04669From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
8.96906From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.258478From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.306325From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.45261From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.79304From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
10.8302From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
3.54968From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.54701From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000357.87626From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.790638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
11.9643From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
6.19136From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
6.42646From_analysisRNASeq.briggsae.WBls:0000038.control_mean
6.47545From_analysisRNASeq.briggsae.WBls:0000038.control_median
6.75954From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000410.620638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.09586From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.19781From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1.22924From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.26066From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.30432From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.28249From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.37255From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.38From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
2.47187From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.419479From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.514525From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.542856From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.698846From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.982368From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
1.035From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.762612From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.855411From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.63824From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001013.44863From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.10113From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
3.68578From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.45649From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00133615
Ortholog (12)
ParalogWBGene00023690Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027659Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028234Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029930Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030483Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033216Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034847Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036200Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036585Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037272Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity. Is an ortholog of C. elegans mec-3. In C. elegans, mec-3 is involved in several processes, including mechanosensory behavior; neuron projection organization; and positive regulation of transcription by RNA polymerase II.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG08386a
CBG08386b
Corresponding_CDS_historyCBG08386:bp194
CBG08386:bp205
Corresponding_transcriptCBG08386a.1
CBG08386b.1
Other_sequence (12)
Experimental_infoExpr_patternExpr1061023
Microarray_resultsGPL8303_CB6_WBGene00030186_A
GPL8303_CB6_WBGene00030186_B
GPL14143_CBG08386_214-273_0.793_53_C
GPL14143_CBG08386_652-711_0.939_3_A
GPL14143_CBG08386_767-826_0.947_2_B
ReferenceWBPaper00046856
MethodGene