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WormBase Tree Display for Gene: WBGene00037272

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Name Class

WBGene00037272SMapS_parentSequencecb25.fpc4069d
IdentityVersion5
NameSequence_nameCBG17716
Molecular_nameCBG17716
CBG17716.1
CBP40138
Other_nameCBG_17716Accession_evidenceNDBHE600976
Public_nameCBG17716
DB_infoDatabaseNDBlocus_tagCBG_17716
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:07WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-exc-9
324 Jul 2008 11:56:36WBPerson1847EventAcquires_mergeWBGene00037271
431 Aug 2016 10:30:13WBPerson4025EventSplit_intoWBGene00270579
520 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameRemoved
Acquires_mergeWBGene00037271
Split_intoWBGene00270579
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000228.4786From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
31.8077From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
31.8963From_analysisRNASeq.briggsae.WBls:0000002.control_mean
35.4027From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
32.2055From_analysisRNASeq.briggsae.WBls:0000002.control_mean
32.4704From_analysisRNASeq.briggsae.WBls:0000002.control_median
33.1331From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000315.2233From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
16.5306From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
17.8378From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
19.1352From_analysisRNASeq.briggsae.WBls:0000003.control_mean
24.3444From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000443.229From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
46.48From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
49.731From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
40.7621From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
47.7048From_analysisRNASeq.briggsae.WBls:0000004.control_mean
48.505From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
56.2971From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002714.4951From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
14.9506From_analysisRNASeq.briggsae.WBls:0000027.control_mean
24.5256From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.83106From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
18.2516From_analysisRNASeq.briggsae.WBls:0000027.control_mean
19.5103From_analysisRNASeq.briggsae.WBls:0000027.control_median
28.1546From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003515.2106From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.8782From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
17.7576From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
19.2567From_analysisRNASeq.briggsae.WBls:0000038.control_median
20.1248From_analysisRNASeq.briggsae.WBls:0000038.control_mean
20.7557From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
29.1075From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:0000041102.466From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
14.1835From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
16.0796From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
17.1665From_analysisRNASeq.briggsae.WBls:0000041.control_median
18.2534From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
37.7456From_analysisRNASeq.briggsae.WBls:0000041.control_mean
122.95From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
59.0306From_analysisRNASeq.briggsae.WBls:0000041.control_median
62.2901From_analysisRNASeq.briggsae.WBls:0000041.control_mean
99.8078From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006315.8297From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
17.822From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
20.385From_analysisRNASeq.briggsae.WBls:0000063.control_mean
25.8898From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
33.3633From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
9.02025From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
10.9456From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
16.8258From_analysisRNASeq.briggsae.WBls:0000063.control_median
18.8118From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010120.7557From_analysisRNASeq.briggsae.total_over_all_stages.control_median
25.9894From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
27.0222From_analysisRNASeq.briggsae.total_over_all_stages.control_median
32.0682From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Contained_in_operonCBOPA0978
Ortholog (30)
ParalogWBGene00023690Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027659Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00028234Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029930Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030186Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030483Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033216Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034847Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036200Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036585Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Zinc finger, LIM-type and LIM domain. Is an ortholog of C. elegans F20D12.7 and exc-9. In C. elegans, exc-9 is involved in anatomical structure morphogenesis; epithelial cell development; and regulation of tube size.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG17716
Corresponding_transcriptCBG17716.1
Other_sequence (105)
Experimental_infoMicroarray_resultsGPL8303_CB6_WBGene00037272_A
Remark[180319 gw3] The CGC name Cbr-exc-9 was deleted as there was no evidence to support it.Curator_confirmedWBPerson4025
MethodGene