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WormBase Tree Display for Gene: WBGene00034840

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Name Class

WBGene00034840SMapS_parentSequencecb25.fpc3857a
IdentityVersion3
NameSequence_nameCBG14288
Molecular_name (15)
Other_nameCBG_14288Accession_evidenceNDBHE600983
Cbr-erp-1From_analysisInferred_from_orthology
Public_nameCBG14288
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:04WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-erp-1
303 Apr 2017 15:22:31WBPerson2970Name_changeOther_nameCbr-erp-1
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00029364
RNASeq_FPKMWBls:000000211.3414From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
14.7272From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
15.5894From_analysisRNASeq.briggsae.WBls:0000002.control_mean
20.6997From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
13.0343From_analysisRNASeq.briggsae.WBls:0000002.control_median
13.7015From_analysisRNASeq.briggsae.WBls:0000002.control_mean
8.03749From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000316.0504From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
25.3489From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
34.6474From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
23.1861From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
24.628From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000428.3178From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
30.1898From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
32.0618From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
30.4495From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
32.5858From_analysisRNASeq.briggsae.WBls:0000004.control_mean
34.5723From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
37.5274From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.454562From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
17.7318From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.61433From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
7.2669From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.2997From_analysisRNASeq.briggsae.WBls:0000027.control_median
16.9851From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
9.69645From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003516.8358From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.3263From_analysisRNASeq.briggsae.WBls:0000038.control_mean
11.5186From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
12.3797From_analysisRNASeq.briggsae.WBls:0000038.control_median
13.2408From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.72639From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
18.8193From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000419.13989From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
9.28732From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
9.34473From_analysisRNASeq.briggsae.WBls:0000041.control_median
9.39267From_analysisRNASeq.briggsae.WBls:0000041.control_mean
9.40214From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
9.74133From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
10.1186From_analysisRNASeq.briggsae.WBls:0000041.control_mean
10.8259From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
12.3151From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
9.57174From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
5.23353From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.80654From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
5.81306From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
6.57081From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
7.97725From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
5.9821From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.19194From_analysisRNASeq.briggsae.WBls:0000063.control_median
9.72493From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010111.5186From_analysisRNASeq.briggsae.total_over_all_stages.control_median
14.6106From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
12.778From_analysisRNASeq.briggsae.total_over_all_stages.control_median
15.9824From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00138321
Ortholog (31)
ParalogWBGene00029081Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040890Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040942Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in cytoplasm. Is an ortholog of C. elegans F35A5.8.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG14288a
CBG14288b
CBG14288c
Corresponding_CDS_historyCBG14288:bp194
CBG14288:bp255
Corresponding_transcriptCBG14288a.1
CBG14288a.2
CBG14288a.3
CBG14288b.1
CBG14288b.2
CBG14288b.3
CBG14288c.1
CBG14288c.2
CBG14288c.3
Other_sequence (51)
Experimental_infoExpr_patternExpr1055134
Microarray_resultsGPL8303_CB6_WBGene00034840_A
GPL8303_CB6_WBGene00034840_B
GPL14143_CBG14288_715-774_0.809_6_C
GPL14143_CBG14288_952-1011_0.814_5_A
GPL14143_CBG14288_1061-1120_0.830_2_B
MethodGene