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WormBase Tree Display for Gene: WBGene00029081

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Name Class

WBGene00029081SMapS_parentSequencecb25.fpc0201
IdentityVersion1
NameSequence_nameCBG06887
Molecular_nameCBG06887
CBG06887.1
CBP07500
Other_nameCBG_06887Accession_evidenceNDBHE601347
Public_nameCBG06887
DB_infoDatabaseNDBlocus_tagCBG_06887
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000211.4542From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
6.27373From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
7.59828From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
8.44207From_analysisRNASeq.briggsae.WBls:0000002.control_mean
8.00161From_analysisRNASeq.briggsae.WBls:0000002.control_median
8.40494From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
8.43279From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000313.8629From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
15.1402From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
16.4174From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
14.2244From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
14.8349From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000413.1562From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
17.2708From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
21.3855From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
14.0637From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
14.7101From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
15.2379From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
15.7107From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:00000270.97541From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
12.319From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
3.80833From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
5.70091From_analysisRNASeq.briggsae.WBls:0000027.control_mean
20.4643From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
8.06367From_analysisRNASeq.briggsae.WBls:0000027.control_median
9.39176From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003511.007From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.0465From_analysisRNASeq.briggsae.WBls:0000038.control_median
12.1252From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
15.0168From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.20473From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
7.96777From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
9.57862From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:000004110.702From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
10.7903From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
11.1582From_analysisRNASeq.briggsae.WBls:0000041.control_median
11.5262From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
12.0975From_analysisRNASeq.briggsae.WBls:0000041.control_mean
15.3714From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
10.2947From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
11.9875From_analysisRNASeq.briggsae.WBls:0000041.control_mean
13.2405From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:000006313.0007From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
7.0093From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
7.34155From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
7.89862From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
8.65362From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
8.78076From_analysisRNASeq.briggsae.WBls:0000063.control_mean
6.65046From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
7.62008From_analysisRNASeq.briggsae.WBls:0000063.control_median
8.42571From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010110.3391From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
11.0435From_analysisRNASeq.briggsae.total_over_all_stages.control_median
10.9769From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
11.4902From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (27)
ParalogWBGene00034840Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040890Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040942Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: SH3 domain and SH3-like domain superfamily. Is an ortholog of C. elegans B0303.7.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG06887
Corresponding_CDS_historyCBG06887:bp194
Corresponding_transcriptCBG06887.1
Other_sequence (29)
Experimental_infoExpr_patternExpr1064635
Microarray_resultsGPL8303_CB6_WBGene00029081_A
GPL8303_CB6_WBGene00029081_B
GPL14143_CBG06887_766-825_0.901_12_B
GPL14143_CBG06887_1019-1078_0.934_1_A
GPL14143_CBG06887_1391-1450_0.912_6_C
MethodGene