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WormBase Tree Display for Gene: WBGene00052222

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Name Class

WBGene00052222SMapS_parentSequenceCrem_Contig8
IdentityVersion3
NameCGC_nameCre-clik-1From_analysisInferred_from_orthology
Sequence_nameCRE31168
Molecular_nameCRE31168
CRE31168.1
RP12419
Other_namecr01.sctg1.wum.110
Public_nameCre-clik-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:25WBPerson1847EventCreated
203 Jul 2008 11:44:31WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE31168
Other_namecr01.sctg1.wum.110
312 Sep 2014 16:59:55WBPerson2970Name_changeCGC_nameCre-clik-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclik
RNASeq_FPKMWBls:000000431.6048From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
32.3116From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
33.0183From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:0000027286.889From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
514.584From_analysisRNASeq.remanei.WBls:0000027.control_mean
519.749From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
535.237From_analysisRNASeq.remanei.WBls:0000027.control_median
550.724From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
700.976From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:00000381370.06From_analysisRNASeq.remanei.WBls:0000038.control_mean
1609.91From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
1671.31From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
828.965From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:00000411172.04From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
1335.93From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
385.117From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
501.336From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
577.547From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
734.89From_analysisRNASeq.remanei.WBls:0000041.control_median
810.7From_analysisRNASeq.remanei.WBls:0000041.control_mean
892.232From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:0000063 (12)
WBls:00001011154.73From_analysisRNASeq.remanei.total_over_all_stages.control_mean
1248.68From_analysisRNASeq.remanei.total_over_all_stages.control_median
Ortholog (29)
ParalogWBGene00051281Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00056204Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00056029Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00056433Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00060094Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00062365Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00064707Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Calponin family repeat and Calponin repeat. Is an ortholog of C. elegans clik-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE31168
Corresponding_transcriptCRE31168.1
Other_sequenceTM01371
HBC00396_1
EX558482.1
FC553205.1
ES411953.1
MH02816
SS00052
FD514539.1
FC554074.1
EX912570.1
BE238880.1
PTC03038_1
Tcol_isotig21744
HCC00238_2
Dviv_isotig21538
FK805935.1
MI04245
MHC00559_1
FK803534.1
FG978461.1
EX010868.1
EV850006.1
BE720936.1
MIC00274_1
EX012465.1
FK803162.1
MHC10917_1
HC01750
FG587533.1
Hbac_isotig01676
JI170148.1
TSC11686_1
FG580994.1
Dviv_isotig21539
SRC00581_1
PPC00090_1
FD516099.1
BUC02242_1
AI124422.1
FG975962.1
AA917202.1
MI00666
FG975940.1
HSC01196_1
ES744157.1
AA917098.1
MJ03496
HGC03647_1
CRC00997_1
EX913599.1
FG972970.1
FG973102.1
HC02852
EX009100.1
BU585516.1
MPC01358_1
FG977067.1
FK800583.1
FG980733.1
PSC03913_1
AW739460.1
SS01423
CSC00877_1
HS01397
EX009877.1
FD516761.1
FD515971.1
AYC00148_1
EX012176.1
AE00245
FD515089.1
JK315831.1
PT00756
ALC00126_1
FG979982.1
BXC05206_1
Oden_isotig17698
EY467013.1
MI03960
LSC01152_1
FG972097.1
ACC04172_1
FC815187.1
FG979085.1
FK808139.1
EX009767.1
EX911957.1
CB038305.1
MJ00830
ES563616.1
FG584607.1
FG975660.1
MJC02507_1
EX545963.1
FG582912.1
HG06882
EX537714.1
FK806543.1
JK315946.1
FD515280.1
Name_isotig02810
CBC02782_1
FD515341.1
HSC00049_1
CN477521.1
MHC12242_1
CBC00649_1
FC553497.1
HG02136
FG975443.1
AW288218.1
TMC00998_1
DAC01603_1
EX542604.1
SSC00421_1
MJC00890_1
BE636527.1
CR05207
AI374068.1
EV854164.1
CK850261.1
GW411185.1
HBC06333_1
FK799985.1
FM207778.1
GRC02492_1
XI03136
ASC04638_1
ES741240.1
CB039027.1
XIC02548_1
HBC19524_1
FC550613.1
FC543248.1
MI03201
HBC08631_1
GRC02177_1
GP01118
EX915266.1
MHC10318_1
JO471741.1
MH01214
MI01488
SR00631
OVC07572_1
GR13322
MI03651
TX00491
BXC04845_1
EX010232.1
FD514291.1
EV850911.1
Tcol_isotig08208
PP01180
CB039195.1
GO239283.1
Tcol_isotig18150
FK807605.1
OVC01646_1
Acan_isotig08419
PTC00635_1
EX545613.1
DVC01906_1
Tcol_isotig08209
RSC03144_1
CB037013.1
PVC03915_1
FK804163.1
ES413668.1
FK809492.1
RS10493
FG980566.1
MJ03009
MIC01705_1
MIC03957_1
PP00368
FC548827.1
FD517095.1
MI03996
PT00122
AS02299
EX551337.1
HC01317
FG973284.1
EX012289.1
FD514196.1
HCC00238_1
FG971020.1
EV850917.1
GE638685.1
HSC00621_1
FG972940.1
FK803394.1
BMC07379_1
SSC01708_1
FD514286.1
ACC38282_1
WBC01736_1
FC809836.1
RS09414
FK802708.1
EL889741.1
MJ02036
FG973625.1
CSC01404_1
TDC00438_1
CB037608.1
TCC00891_1
ACC03652_1
AW313096.1
MJ02037
FG977442.1
EX915195.1
OVC00083_1
RSC01997_1
EX549875.1
FG973636.1
GO250405.1
HS00487
DA00264
HG02965
MHC00559_2
EX561473.1
MH08705
FD514148.1
ACC04159_1
Tcir_isotig07560
OVC05982_1
Experimental_infoExpr_patternExpr1094339
Microarray_resultsGPL14146_CRE31168_529-588_0.913_3_A
GPL14146_CRE31168_943-1002_0.924_1_B
GPL14146_CRE31168_951-1010_0.918_2_C
MethodGene