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WormBase Tree Display for Gene: WBGene00056029

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Name Class

WBGene00056029SMapS_parentSequenceCrem_Contig4
Identity (5)
Gene_infoBiotypeSO:0001217
Gene_classcpn
RNASeq_FPKMWBls:00000040.72491From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
1.70845From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
2.692From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:000002730.4278From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
36.3821From_analysisRNASeq.remanei.WBls:0000027.control_mean
37.8184From_analysisRNASeq.remanei.WBls:0000027.control_median
45.2089From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
5.66464From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
64.2269From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:0000038109.174From_analysisRNASeq.remanei.WBls:0000038.control_mean
13.6228From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
140.273From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
173.627From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004159.2847From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
60.0174From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
62.3017From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
63.6413From_analysisRNASeq.remanei.WBls:0000041.control_median
64.9809From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
66.2476From_analysisRNASeq.remanei.WBls:0000041.control_mean
74.9702From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
75.9304From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
WBls:0000063 (12)
WBls:000010168.6802From_analysisRNASeq.remanei.total_over_all_stages.control_median
69.644From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (30)
ParalogWBGene00064707Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00060094Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00062365Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00051281Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00052222Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00056204Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00056433Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Smooth muscle protein/calponin; CH domain superfamily; Calponin homology domain; and Calponin homology (CH) domain. Is an ortholog of C. elegans cpn-4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE28296
Corresponding_transcriptCRE28296.1
Other_sequence (41)
Experimental_infoExpr_patternExpr1096370
Microarray_resultsGPL14146_CRE28296_266-325_0.838_13_A
MethodGene