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WormBase Tree Display for Gene: WBGene00096592

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Name Class

WBGene00096592SMapS_parentSequencePPA_ChrI
IdentityVersion6
NameCGC_namePpa-ceh-14From_analysisInferred_from_orthology
Sequence_namePPA07038
Molecular_namePPA07038
PPA07038.1
PP55234
Other_nameGENEPREDICTION_SNAP300000064425
GENEPREDICTION_SNAP300000064426
UMM-S139-28.18Person_evidenceWBPerson606
Public_namePpa-ceh-14
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:49WBPerson4055EventAcquires_mergeWBGene00096593
308 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:23WBPerson1983Name_changeCGC_namePpa-ceh-14
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:28WBPerson1983Name_changeCGC_namePpa-ceh-14
Acquires_mergeWBGene00096593
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classceh
RNASeq_FPKMWBls:00000326.4957From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
2.16523From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00176571
Ortholog (29)
ParalogWBGene00094740Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00098361Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00098449Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00099302Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00103143Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111205Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00203796Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00278694Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00306051Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity. Is an ortholog of C. elegans ceh-14. In C. elegans, ceh-14 is involved in neuron development; positive regulation of transcription by RNA polymerase II; and thermosensory behavior.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA07038
Corresponding_transcriptPPA07038.1
Other_sequenceCRC10702_1
Dviv_isotig17430
WBC01851_1
JI173895.1
CR04794
FG582906.1
CK850438.1
Experimental_infoMicroarray_resultsGPL14372_Probes_54262
GPL14372_Probes_54263
Remark[190208 pad] The CGC name Ppa-ceh-14 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Ppa-ceh-14 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene