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WormBase Tree Display for Gene: WBGene00306051

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Name Class

WBGene00306051SMapS_parentSequencePPA_ChrV
IdentityVersion4
NameCGC_namePpa-lin-11From_analysisInferred_from_orthology
Sequence_namePPA47409
Molecular_namePPA47409
PPA47409.1
PP76024
Public_namePpa-lin-11
SpeciesPristionchus pacificus
HistoryVersion_change120 Jan 2020 15:11:43WBPerson4055EventSplit_fromWBGene00101375
204 Jun 2020 14:38:21WBPerson1983Name_changeCGC_namePpa-lin-11
328 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
428 Jul 2021 11:12:27WBPerson1983Name_changeCGC_namePpa-lin-11
Split_fromWBGene00101375
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlin
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00303706
Ortholog (29)
ParalogWBGene00094740Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00096592Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00098361Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00098449Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00099302Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00103143Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111205Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00203796Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00278694Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity. Is an ortholog of C. elegans lin-11. In C. elegans, lin-11 is involved in several processes, including axonal fasciculation; egg-laying behavior; and positive regulation of vulval development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA47409
Corresponding_transcriptPPA47409.1
Other_sequence (13)
Remark[210528 pad] The CGC name Ppa-lin-11 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene