WormBase Tree Display for Gene: WBGene00098449

WBGene00098449 SMap: S_parent: Sequence: PPA_ChrIV
  Identity: Version: 2
    Name: CGC_name: Ppa-exc-9 From_analysis: Inferred_from_orthology
      Sequence_name: PPA08895
      Molecular_name: PPA08895
        PPA08895.1
        PP63183
      Other_name: GENEPREDICTION_SNAP300000065437
        GENEPREDICTION_SNAP300000065438
        UMM-S212-6.40 Person_evidence: WBPerson606
      Public_name: Ppa-exc-9
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:04 WBPerson4055 Event: Imported: from NGASP
        2 24 Nov 2017 09:46:49 WBPerson4055 Event: Acquires_merge: WBGene00098450
      Acquires_merge: WBGene00098450
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: exc
    RNASeq_FPKM: WBls:0000032 6.47617 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 19.1227 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        6.47617 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        8.53296 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    Ortholog (27)
    Paralog: WBGene00094740 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096592 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00098361 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00099302 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00103143 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00111205 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00203796 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278694 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00306051 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Zinc finger, LIM-type and LIM domain. Is an ortholog of C. elegans exc-9. In C. elegans, exc-9 is involved in anatomical structure morphogenesis; epithelial cell development; and regulation of tube size. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA08895
    Corresponding_transcript: PPA08895.1
    Other_sequence (110)
  Experimental_info: Microarray_results: GPL14372_Probes_43664
      GPL14372_Probes_43665
      GPL14372_Probes_43666
      GPL14372_Probes_43667
      GPL14372_Probes_43668
      GPL14372_Probes_43671
    Expression_cluster: WBPaper00041466:PP_germline-ablation_regulated
      WBPaper00041606:PP_X.nematophila_regulated
  Method: Gene