WormBase Tree Display for Gene: WBGene00203796

WBGene00203796 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 6
    Name: CGC_name: Ppa-lim-4 From_analysis: Inferred_from_orthology
      Sequence_name: PPA30930
      Molecular_name: PPA30930
        PPA30930.1
        PP54841
      Other_name: UMM-S7-52.32 Person_evidence: WBPerson606
      Public_name: Ppa-lim-4
    Species: Pristionchus pacificus
    History: Version_change: 1 04 Nov 2010 10:28:59 WBPerson4055 Event: Imported: from Assembly 2
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Ppa-lim-4
        3 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:23 WBPerson1983 Name_change: CGC_name: Ppa-lim-4
        5 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:27 WBPerson1983 Name_change: CGC_name: Ppa-lim-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lim
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
            RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00231307
    Ortholog (28)
    Paralog: WBGene00094740 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096592 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00098361 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00098449 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00099302 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00103143 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00111205 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278694 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00306051 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Is an ortholog of C. elegans lim-4. In C. elegans, lim-4 is involved in several processes, including cell differentiation; positive regulation of transcription by RNA polymerase II; and serotonin biosynthetic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA30930
    Corresponding_transcript: PPA30930.1
    Other_sequence (14)
  Experimental_info: Microarray_results: GPL14372_Probes_8525
      GPL14372_Probes_8526
      GPL14372_Probes_8527
      GPL14372_Probes_8528
      GPL14372_Probes_8530
      GPL14372_Probes_8532
  Remark: [190208 pad] The CGC name Ppa-lim-4 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-lim-4 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene