WormBase Tree Display for Gene: WBGene00117763

WBGene00117763 SMap: S_parent: Sequence: PPA_ChrII
  Identity: Version: 2
    Name: CGC_name: Ppa-unc-54 From_analysis: Inferred_from_orthology
      Sequence_name: PPA28209
      Molecular_name: PPA28209
        PPA28209.1
        PP65746
      Other_name: GENEPREDICTION_SNAP300000086626
        GENEPREDICTION_SNAP300000086627
        UMA-S10-76.28 Person_evidence: WBPerson606
      Public_name: Ppa-unc-54
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:07 WBPerson4055 Event: Imported: from NGASP
        2 24 Nov 2017 09:46:51 WBPerson4055 Event: Acquires_merge: WBGene00117764
      Acquires_merge: WBGene00117764
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000032 4.86452 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 4.17463 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        4.86452 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        7.65936 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00185954
      00185955
      00185956
      00185957
    Ortholog: WBGene00006789 Caenorhabditis elegans From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00038900 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00060889 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00147183 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00131142 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00223568 Brugia malayi From_analysis: WormBase-Compara
      WBGene00224377 Brugia malayi From_analysis: WormBase-Compara
      WBGene00242128 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00246956 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g9085 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g6392 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g5864 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g8240 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g4259 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g22272 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g9281 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g14410 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g1808 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g12497 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00825.g14408 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_15248.g24974 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_20149.g26399 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_20485.g26465 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_22390.g26850 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_26821.g27466 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_27168.g27507 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_27639.g27559 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_I.g3807 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold572.g4325 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01801.g23223 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_06941.g37197 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_09136 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_001454 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02608 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g2033 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10010600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g2982 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00266272 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00292203 Trichuris muris From_analysis: WormBase-Compara
    Paralog (20)
    Structured_description: Automated_description: Predicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Predicted to be part of myosin complex. Is an ortholog of C. elegans unc-54. In C. elegans, unc-54 is involved in several processes, including egg-laying behavior; muscle contraction; and skeletal muscle myosin thick filament assembly. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA28209
    Corresponding_transcript: PPA28209.1
    Other_sequence (422)
  Experimental_info: Microarray_results: GPL14372_Probes_12539
      GPL14372_Probes_58913
      GPL14372_Probes_58914
      GPL14372_Probes_58915
      GPL14372_Probes_58916
    Expression_cluster: WBPaper00041207:PP_dauer_down
  Method: Gene