WormBase Tree Display for Gene: WBGene00130810

WBGene00130810 SMap: S_parent: Sequence: Cjap.Contig18213
  Identity: Version: 3
    Name: CGC_name: Cjp-cgef-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA11606
      Molecular_name: CJA11606
        CJA11606.1
        JA43004
      Other_name: Cjp-tag-150 From_analysis: Inferred_from_orthology
      Public_name: Cjp-cgef-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:22 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-tag-150
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
        3 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cjp-cgef-1
                Other_name: Cjp-tag-150
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cgef
    RNASeq_FPKM: WBls:0000004 19.1306 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 23.7915 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 11.9845 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        12.7664 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        13.5483 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 10.0962 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        10.2461 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        3.00129 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        3.77592 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        4.14855 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        4.45262 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        5.29554 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        6.13845 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        6.34392 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        8.8922 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
      WBls:0000101 8.8922 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        9.16971 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00195884
    Ortholog (52)
    Paralog: WBGene00129233 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00138393 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00215416 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00122877 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00126129 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00127682 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00131668 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00137899 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00182741 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00218818 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable guanyl-nucleotide exchange factor activity. Is an ortholog of C. elegans cgef-1. In C. elegans, cgef-1 is involved in protein localization. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA11606
    Corresponding_transcript: CJA11606.1
    Other_sequence (37)
  Experimental_info: Expr_pattern: Expr1070365
      Expr1079605
      Expr1084588
    Microarray_results: GPL14145_CJA11606_1659-1718_0.909_15_C
      GPL14145_CJA11606_1776-1835_0.957_1_A
      GPL14145_CJA11606_1891-1950_0.947_3_B
      GPL14145_CJA16814_674-733_0.937_2_A
      GPL14145_CJA16814_800-859_0.802_31_C
      GPL14145_CJA16814_806-865_0.924_7_B
      GPL14145_CJA22709_70-129_0.951_1_A
  Method: Gene