WormBase Tree Display for Variation: WBVar00090802
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| WBVar00090802 | Evidence | Paper_evidence | WBPaper00031335 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | n4114 | |||||
| HGVSg | CHROMOSOME_IV:g.14033947_14034094del | ||||||
| Sequence_details | SMap | S_parent | Sequence | Y37A1B | |||
| Flanking_sequences | CTTACCCCCCAAACCCTG | GAAGTTGGGTCTTTTTTGGG | |||||
| Mapping_target | Y37A1B | ||||||
| Type_of_mutation | Deletion | ||||||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00027417 | ||||||
| WBStrain00027572 | |||||||
| WBStrain00027578 | |||||||
| Laboratory | MT | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00195705 | |||||
| WBGene00003280 | |||||||
| WBGene00199919 | |||||||
| Transcript | Y37A1B.16 | ||||||
| Y37A1B.335 | VEP_consequence | non_coding_transcript_exon_variant | |||||
| VEP_impact | MODIFIER | ||||||
| cDNA_position | ?-144 | ||||||
| Exon_number | 1/1 | ||||||
| Y37A1B.330 | VEP_consequence | non_coding_transcript_exon_variant | |||||
| VEP_impact | MODIFIER | ||||||
| cDNA_position | 391-? | ||||||
| Exon_number | 1/1 | ||||||
| Interactor (12) | |||||||
| Isolation | Mutagen | UV-TMP | Paper_evidence | WBPaper00031335 | |||
| Genetics | Interpolated_map_position | IV | 11.1728 | ||||
| Description | Phenotype_not_observed | WBPhenotype:0000031 | Paper_evidence | WBPaper00036127 | |||
| Curator_confirmed | WBPerson712 | ||||||
| WBPhenotype:0000062 | Paper_evidence | WBPaper00035664 | |||||
| WBPaper00036127 | |||||||
| Curator_confirmed | WBPerson2021 | ||||||
| WBPerson712 | |||||||
| Remark | Mutants are viable | Paper_evidence | WBPaper00035664 | ||||
| Curator_confirmed | WBPerson2021 | ||||||
| WBPhenotype:0000207 | Paper_evidence | WBPaper00031335 | |||||
| Curator_confirmed | WBPerson2021 | ||||||
| Remark | Defecation cycle is normal | Paper_evidence | WBPaper00031335 | ||||
| Curator_confirmed | WBPerson2021 | ||||||
| Variation_effect | Probable_null_via_phenotype | Paper_evidence | WBPaper00031335 | ||||
| Curator_confirmed | WBPerson2021 | ||||||
| WBPhenotype:0000634 | Paper_evidence | WBPaper00031335 | |||||
| Curator_confirmed | WBPerson2021 | ||||||
| Remark | Pumping is normal | Paper_evidence | WBPaper00031335 | ||||
| Curator_confirmed | WBPerson2021 | ||||||
| Variation_effect | Probable_null_via_phenotype | Paper_evidence | WBPaper00031335 | ||||
| Curator_confirmed | WBPerson2021 | ||||||
| WBPhenotype:0000643 | Paper_evidence | WBPaper00031335 | |||||
| Curator_confirmed | WBPerson2021 | ||||||
| Remark | non-Unc | Paper_evidence | WBPaper00031335 | ||||
| Curator_confirmed | WBPerson2021 | ||||||
| Variation_effect | Probable_null_via_phenotype | Paper_evidence | WBPaper00031335 | ||||
| Curator_confirmed | WBPerson2021 | ||||||
| WBPhenotype:0001414 | Paper_evidence | WBPaper00036127 | |||||
| Curator_confirmed | WBPerson712 | ||||||
| WBPhenotype:0001748 | Paper_evidence | WBPaper00036127 | |||||
| Curator_confirmed | WBPerson712 | ||||||
| Reference | WBPaper00031335 | ||||||
| WBPaper00035664 | |||||||
| WBPaper00036127 | |||||||
| Method | Deletion_allele |
