WormBase Tree Display for Variation: WBVar00095111
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| WBVar00095111 | Evidence | Paper_evidence | WBPaper00002584 | |||||
|---|---|---|---|---|---|---|---|---|
| Name | Public_name | p671 | ||||||
| Other_name | CE17780:p.Cys231Arg | |||||||
| F36F2.5.1:c.691T>C | ||||||||
| HGVSg | CHROMOSOME_I:g.9023031T>C | |||||||
| Sequence_details | SMap | S_parent | Sequence | C31H5 | ||||
| Flanking_sequences | tacatgacatggctctcactagttacttta | gttttttattcaatgcattttgtattccac | ||||||
| Mapping_target | C31H5 | |||||||
| Type_of_mutation | Substitution | t | c | Paper_evidence | WBPaper00002584 | |||
| SeqStatus | Sequenced | |||||||
| Variation_type | Allele | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Strain | WBStrain00003905 | |||||||
| WBStrain00030780 | ||||||||
| Laboratory | PR | |||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00006525 | ||||||
| Transcript | F36F2.5.1 (12) | |||||||
| Interactor | WBInteraction000504655 | |||||||
| WBInteraction000535464 | ||||||||
| WBInteraction000535465 | ||||||||
| WBInteraction000535466 | ||||||||
| Genetics | Interpolated_map_position | I | 3.40468 | |||||
| Description | Phenotype (15) | |||||||
| Phenotype_not_observed | WBPhenotype:0001736 | Paper_evidence | WBPaper00031959 | |||||
| Curator_confirmed | WBPerson712 | |||||||
| Remark | Animals showed no defect in acetate chemotaxis in water soluble assays when compared to che-1(p679) positive control animals (data not shown). | Paper_evidence | WBPaper00031959 | |||||
| Curator_confirmed | WBPerson712 | |||||||
| Affected_by | Molecule | WBMol:00005057 | Paper_evidence | WBPaper00031959 | ||||
| Curator_confirmed | WBPerson712 | |||||||
| Phenotype_assay | Treatment | For water soluble chemotaxis assays, radial gradients of NaAc were established by diffusion in agar. | Paper_evidence | WBPaper00031959 | ||||
| Curator_confirmed | WBPerson712 | |||||||
| WBPhenotype:0001897 | Paper_evidence | WBPaper00032087 | ||||||
| Curator_confirmed | WBPerson2021 | |||||||
| Remark | Loss-of-function mutations in the TAX-2 CNG channels do not affect the overall locomotion response to short wavelength light | Paper_evidence | WBPaper00032087 | |||||
| Curator_confirmed | WBPerson2021 | |||||||
| Variation_effect | Probable_null_via_phenotype | Paper_evidence | WBPaper00032087 | |||||
| Curator_confirmed | WBPerson2021 | |||||||
| Reference (15) | ||||||||
| Remark | Corrected from pr671 appeared In 2002 European Worm Meeting abstract | Person_evidence | WBPerson712 | |||||
| Method | Substitution_allele |
