WormBase Tree Display for Variation: WBVar00124213

WBVar00124213 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00124213
    Other_name: cbs59734
    HGVSg: chrIII:g.8105625C>T
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc4044a
    Flanking_sequences: acagccaatcccaaaacgaagttcgcatgattgatgcactcggcgtagta gtattcgtttgtggatacactcgatccaacaattcagttgcatagagaac
    Mapping_target: cb25.fpc4044a
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: GTYRAC HincII, HindII 614 244 79 57 6
        GTNNAC Hpy8I 492 244 122 79 57 6
      Polymorphic_strain_digest: GTYRAC HincII, HindII 556 244 79 58 57 6
        GTNNAC Hpy8I 434 244 122 79 58 57 6
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00036546
    Transcript: CBG16666a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: CBG16666a.1:c.2094C>T
        HGVSp: CBP23420.1:p.Thr698%3D
        cDNA_position: 2094
        CDS_position: 2094
        Protein_position: 698
        Exon_number: 12/19
        Codon_change: acC/acT
        Amino_acid_change: T
      CBG16666b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: CBG16666b.1:c.1962C>T
        HGVSp: CBP39579.1:p.Thr654%3D
        cDNA_position: 2067
        CDS_position: 1962
        Protein_position: 654
        Exon_number: 12/18
        Codon_change: acC/acT
        Amino_acid_change: T
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP