WormBase Tree Display for Variation: WBVar01468311
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WBVar01468311 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01468311 | ||||
Other_name | F56B6.2a.1:c.1206-12T>G | |||||
F56B6.2c.1:c.21-12T>G | ||||||
F56B6.2i.1:c.1212-12T>G | ||||||
F56B6.2h.1:c.1212-12T>G | ||||||
F56B6.2b.1:c.1095-12T>G | ||||||
F56B6.2j.1:c.1206-12T>G | ||||||
HGVSg | CHROMOSOME_X:g.3547557T>G | |||||
Sequence_details | SMap | S_parent | Sequence | F56B6 | ||
Flanking_sequences | TTATTTTTCCATAAATCCATCTGTAAAACT | AATATTTTCAGAAAGAAACGAATCCTGGGA | ||||
Mapping_target | F56B6 | |||||
Type_of_mutation | Substitution | t | g | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00031279 | From_analysis | WGS_Andersen | |||
WBStrain00031284 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193353613 | ||
dbSNP_ss | ss | 295529532 | ||||
Status | Live | |||||
Affects | Gene | WBGene00004350 | ||||
Transcript | F56B6.2j.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | F56B6.2j.1:c.1206-12T>G | |||||
Intron_number | 6/14 | |||||
F56B6.2i.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F56B6.2i.1:c.1212-12T>G | |||||
Intron_number | 7/16 | |||||
F56B6.2b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F56B6.2b.1:c.1095-12T>G | |||||
Intron_number | 6/15 | |||||
F56B6.2a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F56B6.2a.1:c.1206-12T>G | |||||
Intron_number | 7/16 | |||||
F56B6.2h.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F56B6.2h.1:c.1212-12T>G | |||||
Intron_number | 7/16 | |||||
F56B6.2c.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F56B6.2c.1:c.21-12T>G | |||||
Intron_number | 1/9 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |