WormBase Tree Display for Variation: WBVar01468312
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| WBVar01468312 | Evidence | Paper_evidence | WBPaper00040707 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01468312 | ||||
| Other_name | cewivar00542199 | |||||
| F56B6.2j.1:c.1706-466A>G | ||||||
| F56B6.2i.1:c.1703-466A>G | ||||||
| F56B6.2h.1:c.1712-466A>G | ||||||
| F56B6.2e.1:c.212-466A>G | ||||||
| F56B6.2c.1:c.512-466A>G | ||||||
| F56B6.2a.1:c.1697-466A>G | ||||||
| F56B6.2b.1:c.1586-466A>G | ||||||
| HGVSg | CHROMOSOME_X:g.3552081A>G | |||||
| Sequence_details | SMap | S_parent | Sequence | F56B6 | ||
| Flanking_sequences | GGTTTTCGATTAAAAGTTAAACGTGTGTGT | TTTTGTATGAGCCATTTGAAAAATGACTCG | ||||
| Mapping_target | F56B6 | |||||
| Type_of_mutation | Substitution | a | g | |||
| SeqStatus | Sequenced | |||||
| Variation_type | SNP | |||||
| Natural_variant | ||||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
| WGS_Andersen | ||||||
| WBStrain00022888 | From_analysis | WGS_Andersen | ||||
| WBStrain00022889 | From_analysis | WGS_Andersen | ||||
| WBStrain00022894 | From_analysis | WGS_Andersen | ||||
| WBStrain00023085 | From_analysis | WGS_Andersen | ||||
| WBStrain00023105 | From_analysis | WGS_Andersen | ||||
| WBStrain00023106 | From_analysis | WGS_Andersen | ||||
| Laboratory | QX | |||||
| Person | WBPerson1730 | |||||
| Analysis | Million_mutation_project_reanalysis | |||||
| WGS_Andersen | ||||||
| DB_info | Database | dbSNP_rs | rs | 193353614 | ||
| dbSNP_ss | ss | 295529533 | ||||
| Status | Live | |||||
| Affects | Gene | WBGene00004350 | ||||
| Transcript | F56B6.2j.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | F56B6.2j.1:c.1706-466A>G | |||||
| Intron_number | 9/14 | |||||
| F56B6.2e.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F56B6.2e.1:c.212-466A>G | |||||
| Intron_number | 1/7 | |||||
| F56B6.2i.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F56B6.2i.1:c.1703-466A>G | |||||
| Intron_number | 10/16 | |||||
| F56B6.2b.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F56B6.2b.1:c.1586-466A>G | |||||
| Intron_number | 9/15 | |||||
| F56B6.2a.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F56B6.2a.1:c.1697-466A>G | |||||
| Intron_number | 10/16 | |||||
| F56B6.2h.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F56B6.2h.1:c.1712-466A>G | |||||
| Intron_number | 10/16 | |||||
| F56B6.2c.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F56B6.2c.1:c.512-466A>G | |||||
| Intron_number | 4/9 | |||||
| Reference | WBPaper00040707 | |||||
| Method | WGS_Andersen |
