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WormBase Tree Display for Variation: WBVar01609402

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Name Class

WBVar01609402NamePublic_nameWBVar01609402
Other_namecewivar00288576
Y54G2A.5b.1:c.64C>G
CE48813:p.Pro4Ala
Y54G2A.5c.1:c.10C>G
CE33889:p.Pro22Ala
CE48099:p.Pro38Ala
Y54G2A.17a.1:c.-39+2973G>C
Y54G2A.5a.1:c.112C>G
HGVSgCHROMOSOME_IV:g.2887427C>G
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesCAATTAGCCGGGCTCAACGAGATGCCGGCGCAGCAGTAGCAGCTCAAAGCATCGGAGGTC
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28874252887425From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionCG
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006622From_analysisMillion_mutation_project_reanalysis
WBStrain00022887From_analysisMillion_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021871
WBGene00021882
TranscriptY54G2A.5b.1 (12)
Y54G2A.5c.1 (12)
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.-39+2973G>C
Intron_number1/8
Y54G2A.5a.1 (12)
MethodWGS_Flibotte