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WormBase Tree Display for Variation: WBVar01609404

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Name Class

WBVar01609404NamePublic_nameWBVar01609404
Other_namecewivar00288578
Y54G2A.5b.1:c.67G>C
CE48813:p.Ala5Pro
Y54G2A.17a.1:c.-39+2970C>G
Y54G2A.5c.1:c.13G>C
Y54G2A.5a.1:c.115G>C
CE33889:p.Ala23Pro
CE48099:p.Ala39Pro
HGVSgCHROMOSOME_IV:g.2887430G>C
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesTTAGCCGGGCTCAACGAGATGCCGGCGCCACAGTAGCAGCTCAAAGCATCGGAGGTCAGA
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28874282887428From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionGC
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006622From_analysisMillion_mutation_project_reanalysis
WBStrain00022887From_analysisMillion_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021871
WBGene00021882
TranscriptY54G2A.5b.1 (12)
Y54G2A.5c.1 (12)
Y54G2A.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G2A.17a.1:c.-39+2970C>G
Intron_number1/8
Y54G2A.5a.1 (12)
MethodWGS_Flibotte