WormBase Tree Display for Expression_cluster: WBPaper00050265:C.albidus_vs_OP50_upregulated

WBPaper00050265:C.albidus_vs_OP50_upregulated Description: Transcripts that showed significantly increased expression after fed with yeast culture C.albidus, comparing to fed with OP50.
  Species: Pristionchus pacificus
  Algorithm: Cuffdiff (version 2.0.1)
  Reference: WBPaper00050265
  Based_on_WB_Release
  Gene: WBGene00089661
    WBGene00090112
    WBGene00090857
    WBGene00091746
    WBGene00091849
    WBGene00092151
    WBGene00093743
    WBGene00094449
    WBGene00094570
    WBGene00095271
    WBGene00096263
    WBGene00096341
    WBGene00096849
    WBGene00096875
    WBGene00097041
    WBGene00098012
    WBGene00098143
    WBGene00098476 fold change: 2.7394191021, p-value: 0.00510576
    WBGene00098563
    WBGene00098761
    WBGene00099475
    WBGene00099712
    WBGene00101173
    WBGene00101502
    WBGene00101908
    WBGene00102536
    WBGene00102740
    WBGene00103412
    WBGene00103899
    WBGene00103966
    WBGene00104201
    WBGene00104242
    WBGene00105232
    WBGene00105613
    WBGene00106662
    WBGene00106928
    WBGene00107068
    WBGene00108252
    WBGene00108507
    WBGene00108676 fold change: 3.9390015919, p-value: 0.0124965
    WBGene00109143
    WBGene00109310 fold change: 2.3974321734, p-value: 0.0163573
    WBGene00109585 fold change: 2.3689208561, p-value: 1.67352E-07
    WBGene00109731
    WBGene00109902
    WBGene00110020 fold change: 2.060864997, p-value: 0.00113574
      fold change: 2.2325461527, p-value: 0.00579955
    WBGene00110881
    WBGene00111174 fold change: 3.8272018712, p-value: 4.95974E-14
    WBGene00111400
    WBGene00112477
    WBGene00112625
    WBGene00113149
    WBGene00113222
    WBGene00113225
    WBGene00113407
    WBGene00113697 fold change: 2.4185292734, p-value: 6.48384E-06
      fold change: 3.0270027797, p-value: 4.10608E-07
    WBGene00114195
    WBGene00115352
    WBGene00116824
    WBGene00118790
    WBGene00203499
    WBGene00203851
    WBGene00204834 fold change: 1.8203943327, p-value: 0.0181894
    WBGene00205145 fold change: 1.3759528177, p-value: 0.0336994
    WBGene00205248 fold change: 1.5408719761, p-value: 0.00954356
      fold change: 1.999510698, p-value: 0.0349802
      fold change: 2.0162716156, p-value: 0.000220431
      fold change: 2.5429621697, p-value: 0.0446674
    WBGene00205288 fold change: 3.1873114505, p-value: 3.47634E-06
      fold change: 4.3039759012, p-value: 3.62149E-09
      fold change: 11.4864413797, p-value: 0.0442872
      fold change: 25.4416441188, p-value: 1.71965E-12
    WBGene00205791
    WBGene00205862 fold change: 2.5402139264, p-value: 1.46155E-06
      fold change: 14.9506883036, p-value: 0.000251295
    WBGene00205869 fold change: 1.8003095641, p-value: 0.031366
      fold change: 2.895334433, p-value: 0.0233316
      fold change: 4.6886090893, p-value: 8.11166E-07
    WBGene00205894 fold change: 7.6314119152, p-value: 0
    WBGene00205926 (18)
    WBGene00205944 fold change: 2.0944333865, p-value: 0.0084786
      fold change: 2.1465056943, p-value: 0.00591292
      fold change: 2.2322057324, p-value: 0.00494128
      fold change: 3.1169175658, p-value: 2.0882E-06
      fold change: 3.3215117085, p-value: 0.00371183
      fold change: 6.9089190104, p-value: 0.0328367
      fold change: 7.2285185295, p-value: 0.0119727
    WBGene00205972 fold change: 1.6697047305, p-value: 0.0193392
      fold change: 2.051586524, p-value: 0.0276943
      fold change: 2.3159594605, p-value: 0.000252239
      fold change: 3.2275736125, p-value: 3.23372E-05
    WBGene00206066 fold change: 1.64395066, p-value: 0.0256784
      fold change: 1.9171297754, p-value: 0.00601828
      fold change: 1.9830513008, p-value: 0.00282019
      fold change: 2.0286500274, p-value: 0.00971547
      fold change: 3.3367879329, p-value: 0.000007997
    WBGene00206082 fold change: 1.9659300638, p-value: 0.00673337
      fold change: 2.0471545177, p-value: 0.0332533
      fold change: 2.3312762983, p-value: 0.00161157
      fold change: 2.6668746203, p-value: 3.84558E-05
    WBGene00206111 fold change: 3.596017396, p-value: 0.0107477
    WBGene00206138 (27)
    WBGene00206139 fold change: 1.9289489999, p-value: 0.0360291
      fold change: 2.3684283041, p-value: 0.0133152
      fold change: 2.5662825123, p-value: 1.88298E-09
      fold change: 2.6607445348, p-value: 0.000000047
      fold change: 2.7577467939, p-value: 0.000584148
      fold change: 4.3346034052, p-value: 0.00741506
    WBGene00206147 (11)
    WBGene00206150 (27)
    WBGene00206155 fold change: 2.3381864876, p-value: 3.32872E-08
      fold change: 6.7789883902, p-value: 3.5576E-07
    WBGene00206177 fold change: 1.3792710513, p-value: 0.030864
      fold change: 1.9363718147, p-value: 0.0188948
      fold change: 1.9577099035, p-value: 0.0257169
      fold change: 2.0129202288, p-value: 0.00323503
    WBGene00206209 (18)
    WBGene00206230 fold change: 1.651358094, p-value: 0.00260146
      fold change: 1.711729815, p-value: 0.00220146
      fold change: 1.8003494967, p-value: 0.0095607
      fold change: 1.8323549519, p-value: 0.0321831
      fold change: 1.9816044315, p-value: 0.00312989
    WBGene00206237 (23)
    WBGene00206240 fold change: 1.3840154038, p-value: 0.0279826
      fold change: 1.858084355, p-value: 0.0442826
      fold change: 2.2658462975, p-value: 0.013744
      fold change: 2.3740659292, p-value: 0.0195807
      fold change: 2.9350803526, p-value: 3.01258E-05
    WBGene00206243 fold change: 2.2500077957, p-value: 0.00536281
      fold change: 2.31491625, p-value: 0.0245765
      fold change: 2.8010543949, p-value: 0.00725234
    WBGene00206246 fold change: 1.6738381097, p-value: 0.028315
      fold change: 1.9515900054, p-value: 0.0204197
      fold change: 1.9537610056, p-value: 0.01821
      fold change: 2.1023895357, p-value: 0.0327203
      fold change: 2.1531965218, p-value: 0.0105746
      fold change: 3.3456116714, p-value: 8.21492E-07
      fold change: 3.5815150389, p-value: 6.45761E-08
      fold change: 3.7319508864, p-value: 1.34702E-05
      fold change: 3.7969473655, p-value: 0.00172474
    WBGene00206257 (17)
    WBGene00206260 fold change: 2.3033601397, p-value: 0.000329288
      fold change: 2.5083001582, p-value: 7.65558E-05
      fold change: 8.8192746208, p-value: 0
      fold change: 16.7912764378, p-value: 0.00221666
      fold change: 43.1461522117, p-value: 0
    WBGene00206275 (17)
    WBGene00206295 (18)
    WBGene00206313 (25)
    WBGene00206315 (16)
    WBGene00206316 fold change: 2.134709862, p-value: 4.50643E-05
      fold change: 2.5536485757, p-value: 0.000210468
      fold change: 2.9286382495, p-value: 2.60025E-13
      fold change: 3.1039815883, p-value: 0.00794779
      fold change: 3.6611579097, p-value: 6.61773E-05
      fold change: 5.0673096821, p-value: 0.0013422
      fold change: 6.5394531591, p-value: 3.85042E-12
    WBGene00206323 (20)
    WBGene00206334 (11)
    WBGene00206341 fold change: 2.2515679229, p-value: 0.0301841
      fold change: 2.94184248, p-value: 0.00348611
      fold change: 3.3501135601, p-value: 0.000329288
    WBGene00206345 (18)
    WBGene00206346 (16)
    WBGene00206349 fold change: 1.7091582719, p-value: 0.0325866
      fold change: 1.7879284458, p-value: 0.0127386
      fold change: 2.0986040578, p-value: 0.000785421
      fold change: 2.3876146317, p-value: 0.00684928
      fold change: 2.633314802, p-value: 0.00217318
      fold change: 3.1211333554, p-value: 0.00518685
      fold change: 3.5136975178, p-value: 0.0456803
      fold change: 4.9493875039, p-value: 4.26086E-12
      fold change: 6.4829479953, p-value: 0.041507
      fold change: inf, p-value: 0.014407
    WBGene00206351 (21)
    WBGene00093134
    WBGene00093270
    WBGene00102615
    WBGene00111889 fold change: 3.6623000624, p-value: 0.029431
      fold change: 4.1904640031, p-value: 0.0307842
    WBGene00113005
    WBGene00115943 fold change: 2.9796853656, p-value: 0.0104673
    WBGene00116691
    WBGene00203803 fold change: 2.6778033179, p-value: 0.000509886
    WBGene00204715 fold change: 1.9021209689, p-value: 0.0274648
    WBGene00204807 fold change: 1.9374042345, p-value: 0.00225067
    WBGene00205853 fold change: 2.802297258, p-value: 0.000211614
      fold change: 10.2054649048, p-value: 0.000223174
      fold change: inf, p-value: 0.000823333
    WBGene00206262 fold change: 1.9407926609, p-value: 0.000720055
      fold change: 1.9850220043, p-value: 0.00112474
      fold change: 2.7653651647, p-value: 0.0173831
      fold change: 3.2649479671, p-value: 0.00288256
      fold change: 3.5142820887, p-value: 0.000000141
    WBGene00206336 fold change: 1.9746555253, p-value: 1.00398E-05
      fold change: 2.0074026149, p-value: 0.000112197
      fold change: 2.3749053218, p-value: 0.0368648
      fold change: 7.085206984, p-value: 0
      fold change: 10.3719122461, p-value: 0
  Attribute_of: RNASeq
  Regulation: Regulated_by_treatment: Yeast culture: C.albidus
  Associated_with: Life_stage: WBls:0000104