WormBase Tree Display for Gene: WBGene00001072

WBGene00001072 SMap: S_parent: Sequence: T14B4
  Identity: Version: 2
    Name: CGC_name: dpy-10 Person_evidence: WBPerson261
      Sequence_name: T14B4.7
      Molecular_name: T14B4.7
        T14B4.7.1
        CE51880
      Other_name: rol-7
        CELE_T14B4.7 Accession_evidence: NDB BX284602
      Public_name: dpy-10
    DB_info: Database: AceView gene 2H0
        WormQTL gene WBGene00001072
        WormFlux gene WBGene00001072
        NDB locus_tag CELE_T14B4.7
        Panther gene CAEEL|WormBase=WBGene00001072|UniProtKB=P35800
          family PTHR24637
        NCBI gene 36805042
        RefSeq protein NM_001348636.5
        SwissProt UniProtAcc P35800
        UniProt_GCRP UniProtAcc P35800
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:22 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 06 Mar 2018 14:35:46 WBPerson4025 Event: Split_into: WBGene00302993
      Split_into: WBGene00302993
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dpy
    Reference_allele: WBVar00142982
    Allele (51)
    Possibly_affected_by: WBVar02152815
      WBVar02152872
      WBVar02157712
      WBVar02158431
      WBVar02158465
      WBVar02158466
      WBVar02158831
    Legacy_information: e128 : small dumpy (non-roller); sometimes poor freezing. ES3 (all stages) ME1. NA > 10 (e223 sc48 (left roller dumpy) sc30ts (left roller dumpy at 25x) sc? (pka rol-7) etc.).
      [C.elegansII] e128 : small dumpy (non-roller); sometimes poor survival from freezing; non-null. Suppresses some alleles of glp-1, emb-5.ES3 (all stages) ME1. OA>10: e223, sc48 (left roller dumpy), sc30ts (pka rol-7, left roller dumpy at 25C),cn64 (dominant left roller), q291, s364fdi etc.Cloned: encodes collagen 41% identical to DPY-2. e128 is splicing defect, cg36 (left roller dumpy, ochre, probable null). [Brenner 1974; Levy et al. 1993; CH]
    Strain (668)
    RNASeq_FPKM (74)
    GO_annotation (12)
    Contained_in_operon: CEOP5607
    Ortholog (22)
    Paralog: WBGene00000251 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000252 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000256 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000527 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000593 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000594 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000596 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000597 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000598 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000601 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000602 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000603 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000608 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000609 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000610 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000611 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000613 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000614 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000615 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000616 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000618 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000620 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000621 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000622 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000623 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000625 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000626 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000628 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000629 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000630 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000631 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000632 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000633 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000634 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000636 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000638 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000639 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000640 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000641 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000644 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000645 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000647 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000648 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000649 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000650 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000651 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000652 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000653 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000654 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000655 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000656 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000657 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000658 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000659 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000662 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000663 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000665 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000666 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000667 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000668 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000669 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000670 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000671 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000672 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000673 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000674 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000675 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000676 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000677 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000678 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000679 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000680 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000681 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000682 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000683 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000684 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000685 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000687 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000688 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000689 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000690 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000691 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000692 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000693 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000694 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000695 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000696 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000697 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000698 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000699 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000702 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000703 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000704 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000705 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000706 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000707 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000708 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000710 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000711 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000712 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000713 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000714 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000715 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000716 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000719 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000720 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000722 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000723 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000724 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000725 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000726 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000727 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000728 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000729 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000730 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000731 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000732 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000733 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000734 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000735 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000736 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000737 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000738 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000739 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000740 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000741 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000742 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000743 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000744 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000745 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000746 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000747 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000748 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000750 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000751 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000752 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000753 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000754 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000756 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000758 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000759 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001064 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001065 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001066 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001069 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001070 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001071 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001074 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001075 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001076 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001263 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00002280 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00003057 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00003169 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00004300 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00004394 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00004397 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00004398 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00005017 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00005018 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00013489 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: A cuticle collagen protein that afffects body morphology and movement and genetically interacts with the sqt-1 collagen gene. Paper_evidence: WBPaper00001792
          Curator_confirmed: WBPerson324
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to be a structural constituent of collagen and cuticulin-based cuticle. Involved in several processes, including cuticle development involved in collagen and cuticulin-based cuticle molting cycle; locomotion; and post-embryonic body morphogenesis. Predicted to be part of collagen trimer. Used to study skin disease. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Experimental_model: DOID:37 Homo sapiens Paper_evidence: WBPaper00061220
          Curator_confirmed: WBPerson324
          Date_last_updated: 02 May 2022 00:00:00
  Models_disease_asserted: WBDOannot00001178
  Molecular_info: Corresponding_CDS: T14B4.7
    Corresponding_CDS_history: T14B4.7:wp86
      T14B4.7a:wp257
      T14B4.7a:wp264
      T14B4.7b:wp97
      T14B4.7b:wp257
      T14B4.7c:wp264
    Corresponding_transcript: T14B4.7.1
    Corresponding_transcript_history: T14B4.7b:wp264
    Other_sequence: MHC07417_1
      MH05682
      PPC08679_1
    Associated_feature: WBsf650168
      WBsf650169
      WBsf665638
      WBsf223225
  Experimental_info: RNAi_result (35)
    Expr_pattern: Expr1022469
      Expr1030680
      Expr1156899
      Expr2011055
      Expr2029292
    Drives_construct: WBCnstr00037099
    Construct_product: WBCnstr00037099
    Regulate_expr_cluster: WBPaper00035873:dpy-10_regulated
    Microarray_results (26)
    Expression_cluster (274)
    Interaction (195)
    WBProcess: WBbiopr:00000124
  Map_info: Map: II Position: 0
    Well_ordered
    Positive: Inside_rearr: mnDf40
        mC6
      Positive_clone: T14B4 Inferred_automatically: From sequence, transcript, pseudogene data
        ZK857
    Mapping_data: 2_point (51)
      Multi_point: 41
        45
        46
        47
        48
        49
        50
        51
        53
        54
        55
        56
        57
        206
        207
        208
        254
        273
        274
        319
        321
        323
        413
        437
        467
        468
        470
        475
        477
        485
        519
        521
        528
        537
        571
        591
        597
        631
        632
        633
        698
        699
        700
        701
        704
        706
        717
        721
        725
        726
        733
        736
        743
        745
        816
        817
        818
        819
        820
        823
        826
        828
        829
        830
        831
        836
        837
        838
        839
        840
        841
        844
        845
        847
        850
        851
        852
        853
        881
        882
        961
        1052
        1055
        1057
        1058
        1061
        1063
        1065
        1066
        1067
        1068
        1070
        1071
        1072
        1296
        1360
        1361
        1384
        1389
        1392
        1394
        1442
        1468
        1471
        1472
        1473
        1474
        1475
        1477
        1478
        1556
        1671
        1676
        1789
        2030
        2031
        2036
        2072
        2073
        2251
        2252
        2253
        2254
        2255
        2310
        2311
        2317
        2321
        2322
        2324
        2335
        2336
        2423
        2424
        2653
        2654
        2655
        2657
        2658
        2659
        2771
        2772
        2793
        2794
        2795
        3047
        3049
        3050
        3051
        3052
        3121
        3136
        3147
        3148
        3149
        3221
        3222
        3292
        3342
        3346
        3348
        3412
        3451
        3459
        3461
        3462
        3463
        3464
        3465
        3466
        3523
        3561
        3568
        3570
        3599
        3604
        3613
        3617
        3636
        3654
        3826
        3847
        3896
        3897
        3942
        3951
        4005
        4011
        4012
        4059
        4072
        4103
        4104
        4122
        4123
        4643
        4771
        5697
        5718
        5719
        5720
        5737
      Pos_neg_data (26)
    Landmark_gene
  Reference (203)
  Method: Gene