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WormBase Tree Display for Gene: WBGene00056433

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Name Class

WBGene00056433SMapS_parentSequenceCrem_Contig4
IdentityVersion3
NameCGC_nameCre-clik-3From_analysisInferred_from_orthology
Sequence_nameCRE28045
Molecular_nameCRE28045
CRE28045.1
RP42976
Other_namecr01.sctg6.wum.505
Public_nameCre-clik-3
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
203 Jul 2008 11:45:04WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE28045
Other_namecr01.sctg6.wum.505
308 Feb 2019 15:42:27WBPerson1983Name_changeCGC_nameCre-clik-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclik
RNASeq_FPKMWBls:00000040.466646From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
1.36127From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
2.25589From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002710.5705From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
36.6022From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
43.5628From_analysisRNASeq.remanei.WBls:0000027.control_mean
44.9544From_analysisRNASeq.remanei.WBls:0000027.control_median
53.3066From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
73.7718From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
WBls:000003816.9003From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
55.8026From_analysisRNASeq.remanei.WBls:0000038.control_mean
70.5411From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
79.9664From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:0000041101.182From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
103.531From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
44.8807From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
46.6704From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
54.2857From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
70.7149From_analysisRNASeq.remanei.WBls:0000041.control_median
72.949From_analysisRNASeq.remanei.WBls:0000041.control_mean
87.144From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
WBls:0000063 (12)
WBls:000010159.3412From_analysisRNASeq.remanei.total_over_all_stages.control_median
59.5942From_analysisRNASeq.remanei.total_over_all_stages.control_mean
OrthologWBGene00019361Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00035326Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00148010Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00225047Brugia malayiFrom_analysisWormBase-Compara
WBGene00237667Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g9920Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g13053Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g17702Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g20346Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g1822Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g14514Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g13613Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g7863Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g2978Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g20130Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00016.g1045Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_I.g901Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold627.g6814Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00181.g6438Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_08122Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_002119Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05794Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g16589Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10172300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g506Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00051281Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00052222Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00056029Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00056204Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00060094Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00062365Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00064707Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Calponin family repeat and Calponin repeat. Is an ortholog of C. elegans clik-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE28045
Corresponding_transcriptCRE28045.1
Other_sequenceMH02574
EX552332.1
Tcol_isotig01223
XI03346
FC550839.1
BU086692.1
TDC00907_1
BU666126.1
Hbac_isotig00534
MH02608
SRC01006_1
Oden_isotig09581
MIC08373_1
MHC01579_1
Tcol_isotig17722
MHC00100_1
ASC04946_1
BU089110.1
Tcol_isotig01224
Dviv_isotig11952
Tcol_isotig01225
MI08556
Dviv_isotig11949
GR12305
BU087355.1
CJC05277_1
Hbac_isotig00533
CB038742.1
MH08343
MHC06588_1
Tcir_isotig27749
Dviv_isotig11951
AM743751.1
HBC00662_1
FC550768.1
MJC04500_1
EX537110.1
BU088429.1
FC816549.1
XI04502
MCC01950_1
JI172179.1
HC06371
CRC10015_1
EX546970.1
AYC01404_1
CR12600
EX553032.1
ES409121.1
EX554057.1
Tcol_isotig01226
Oden_isotig09579
EX563701.1
ES672863.1
MJ05009
Acan_isotig04445
Oden_isotig09578
CSC00514_1
FC552817.1
ACC17953_1
ACC20681_1
EW742064.1
Acan_isotig04444
NAC00859_1
FD514134.1
Oden_isotig09580
EX552159.1
EX555654.1
TDC00727_1
MIC01173_1
CB038423.1
ACC00212_1
BU086943.1
XIC02896_1
SSC01235_1
BU086952.1
ES410175.1
Dviv_isotig11950
MI01702
BU087607.1
AS08580
HCC05909_1
PPC12354_1
SS00489
MH02933
EX560445.1
MC03779
ES672843.1
EX562120.1
BU666420.1
EX551366.1
AE00891
BU088628.1
Experimental_infoExpr_patternExpr1116047
Microarray_resultsGPL14146_CRE28045_486-545_0.937_1_B
GPL14146_CRE28045_556-615_0.931_2_A
GPL14146_CRE28045_685-744_0.918_7_C
MethodGene