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WormBase Tree Display for Gene: WBGene00304898

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Name Class

WBGene00304898SMapS_parentSequencePPA_ChrI
IdentityVersion1
NameSequence_namePPA47045
Molecular_namePPA47045
PPA47045.1
PP75114
Public_namePPA47045
SpeciesPristionchus pacificus
HistoryVersion_change125 Jul 2019 15:15:03WBPerson4055EventSplit_fromWBGene00096476
Split_fromWBGene00096476
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000321.90385From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010111.2423From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
1.90385From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
4.38205From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
OrthologWBGene00151558Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00161938Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00164128Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00034778Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041133Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00233956Brugia malayiFrom_analysisWormBase-Compara
WBGene00006810Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00010685Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00123062Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00127334Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00242169Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g2528Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g9851Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g13119Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g13120Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g16341Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g2549Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g5704Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g9739Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g3871Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g8447Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g10480Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g12459Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g19041Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g5887Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g6423Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g9006Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5069Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g15620Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g17616Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g13888Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g19896Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g25454Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g25899Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g14543Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g16269Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00653.g13184Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00653.g13194Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_01196.g15949Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_19724.g26308Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_V.g21019Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_X.g23863Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g18166Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold630.g20074Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01542.g21589Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01673.g22444Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00838Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_20525Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_020568Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_024093Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g19544Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g5756Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50339600Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_X0270800Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00051990Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00067947Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00256053Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00287933Trichuris murisFrom_analysisWormBase-Compara
chrV_pilon.g16709Caenorhabditis elegansFrom_analysisWormBase-Compara
chrX_pilon.g18753Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00280701Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: WD40/YVTN repeat-like-containing domain superfamily; WD domain, G-beta repeat; WD40 repeat; and WD40-repeat-containing domain superfamily. Is an ortholog of C. elegans aipl-1 and unc-78. In C. elegans, unc-78 is involved in several processes, including myofibril assembly; regulation of actin polymerization or depolymerization; and regulation of locomotion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA47045
Corresponding_transcriptPPA47045.1
Experimental_infoMicroarray_resultsGPL14372_Probes_54528
GPL14372_Probes_54529
Expression_clusterWBPaper00041466:PP_germline-ablation_regulated
MethodGene