WormBase Tree Display for Gene: WBGene00027123

WBGene00027123 SMap: S_parent: Sequence: cb25.fpc0081
  Identity: Version: 2
    Name: CGC_name: Cbr-sti-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG04457
      Molecular_name: CBG04457
        CBG04457.1
        CBP06756
      Other_name: CBG_04457 Accession_evidence: NDB HE601251
      Public_name: Cbr-sti-1
    DB_info: Database: NDB locus_tag CBG_04457
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:56 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 24 Jun 2009 12:00:14 WBPerson9133 Name_change: CGC_name: Cbr-sti-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sti
    RNASeq_FPKM: WBls:0000002 136.909 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        138.859 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        172.493 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        241.711 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        125.794 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        137.884 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        160.818 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 165.356 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        166.214 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        167.071 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        173.036 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        186.682 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 122.295 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        127.945 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        133.594 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        136.417 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        139.951 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        141.326 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        144.919 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 115.315 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
        123.279 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
        137.968 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
        138.498 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
        151.174 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
        164.38 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
        180.016 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
        294.437 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
        37.9104 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
        104.455 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
        38.762 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
        43.3222 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
      WBls:0000027 16.3235 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        193.822 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        47.9597 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        86.0351 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        101.761 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        148.938 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        98.4489 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
      WBls:0000035 90.4271 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 103.114 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        139.25 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        140.773 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        178.433 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        182.621 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        92.8306 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 180.991 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        193.194 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        198.388 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        199.329 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        205.465 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        213.902 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        201.655 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        202.91 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        203.56 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        222.254 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 119.931 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        134.573 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        145.384 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        146.658 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        163.472 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        270.814 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        122.302 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        139.979 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        156.61 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 145.384 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        149.734 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        145.152 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        152.003 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Contained_in_operon: CBOPA0645
    Ortholog: WBGene00019983 Caenorhabditis elegans From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00063582 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00139131 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00134316 Caenorhabditis japonica From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00097627 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      CBOVI.g147 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g15839 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g1344 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g5800 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g19320 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g2204 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g2543 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g16053 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g10333 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g18314 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1901 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00052.g2723 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-sti-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g12012 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_02696.g27585 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_21563 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_021987 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05637 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g187 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50427300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00225577 Brugia malayi From_analysis: WormBase-Compara
      chrV_pilon.g13113 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00243153 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00263687 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00297457 Trichuris muris From_analysis: WormBase-Compara
      WBGene00301108 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00025351 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00025500 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033483 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00035594 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00087869 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Heat shock chaperonin-binding; Tetratricopeptide repeat; Tetratricopeptide repeat 2; TPR repeat; STI1 domain; and Tetratricopeptide-like helical domain superfamily. Is an ortholog of C. elegans sti-1. In C. elegans, sti-1 is involved in determination of adult lifespan; reproduction; and response to heat. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG04457
    Corresponding_CDS_history: CBG04457:bp194
    Corresponding_transcript: CBG04457.1
    Other_sequence: AYC01479_1
      PTC01174_1
      EL888064.1
      HG11948
      MI04350
      ES564354.1
      FC542711.1
      TSC00422_1
      MCC01587_1
      FG582168.1
      ES740228.1
      ES743180.1
      ES566028.1
      TS00159
      DIC00347_1
      FD516886.1
      EX565874.1
      MIC01310_1
      FC548768.1
      EX552250.1
      ASC04063_1
      EX565967.1
      HGC03419_1
      FD517154.1
      CRC02877_1
      EX012856.1
      MJ02335
      HG11075
      SC00534
      Acan_isotig09361
      Tcol_isotig04186
      FC816428.1
      MI01745
      JO468412.1
      XI01147
      SRC00779_1
      EX915528.1
      FD516702.1
      Dviv_isotig14591
      AE00878
      CD203458.1
      PPC02169_1
      PP00282
      ES739604.1
      CJC10649_1
      EX562542.1
      NBC00520_1
      HBC04501_1
      FC821214.1
      Tcol_isotig04188
      SR02016
      ACC00426_1
      BXC00431_1
      TM03257
      Name_isotig03469
      BU088658.1
      Hbac_isotig01606
      JI171519.1
      Name_isotig03425
      FC810965.1
      EX564107.1
      Dviv_isotig14590
      HG01841
      DA01687
      MH00186
      MAC01182_1
      AE00610
      EX555409.1
      MHC12151_1
      ACC10991_1
      OVC01402_1
      NAC00660_1
      EX565927.1
      XI01045
      EX014633.1
      ES741152.1
      PP02126
      XIC01789_1
      LSC01621_1
      DI01176
      CBC00751_1
      GRC02214_1
      DI01122
      MC00784
      Acan_isotig06542
      MA01865
      SR03285
      FC818988.1
      DIC00678_1
      PT01769
      CJC03020_1
      FC821825.1
      BXC03387_1
      FK800161.1
      AI111247.1
      NB08111
      Tcir_isotig02699
      Dviv_isotig14589
      CR01890
      MH00185
      BUC00537_1
      PVC03969_1
      MJC01384_1
      HGC09821_1
      PPC05088_1
      CSC00323_1
      GR977859.1
      DA01688
      GR11778
      HBC17061_1
      Tcol_isotig04187
      MHC00303_1
      Tcir_isotig02698
      DI00167
      AS01214
      GR13104
      DAC00484_1
      DIC00728_1
      NB11624
      MHC10728_1
      Oden_isotig19859
  Experimental_info: Expr_pattern: Expr1057886
    Microarray_results: GPL8303_CB6_WBGene00027123_A
      GPL8303_CB6_WBGene00027123_B
      GPL14143_CBG04457_68-127_0.898_18_B
      GPL14143_CBG04457_256-315_0.877_32_C
      GPL14143_CBG04457_469-528_0.911_12_A
    Expression_cluster: WBPaper00058955:heatshock_upregulated_CBG
  Method: Gene