WormBase Tree Display for Gene: WBGene00025500

WBGene00025500 SMap: S_parent: Sequence: cb25.fpc0058
  Identity: Version: 2
    Name: CGC_name: Cbr-ttc-4 From_analysis: Inferred_from_orthology
      Sequence_name: CBG02451
      Molecular_name: CBG02451
        CBG02451.1
        CBP48018
      Other_name: CBG_02451 Accession_evidence: NDB HE601438
      Public_name: Cbr-ttc-4
    DB_info: Database: NDB locus_tag CBG_02451
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:55 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 06 Sep 2017 09:35:13 WBPerson2970 Name_change: CGC_name: Cbr-ttc-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ttc
    RNASeq_FPKM: WBls:0000002 0.421052 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        19.6898 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        6.70362 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        10.0554 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        12.8367 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        31.2361 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 12.2522 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        6.1261 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        4.08407 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 0 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        1.68009 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        8.40047 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 10.1615 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
        0 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
        2.04321 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
        22.6665 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
        36.2324 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
        8.17283 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
        14.6521 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
        14.7085 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
        29.3785 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
      WBls:0000027 0.743605 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.961998 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        2.14239 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        1.443 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        3.14483 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        9.69332 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 9.74295 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 11.5476 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        4.47202 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        6.4801 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        7.18641 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        9.90079 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
      WBls:0000041 29.6998 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        65.0487 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        73.9091 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        75.5574 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        77.2057 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        79.3803 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        43.4715 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        57.9055 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        60.262 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        65.9073 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
      WBls:0000063 17.9283 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        3.58566 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        2.98805 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 0.421052 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        12.3175 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.582328 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        13.3662 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00128902
    Ortholog (28)
    Paralog: WBGene00025351 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027123 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033483 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00035594 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00087869 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable Hsp90 protein binding activity. Is an ortholog of C. elegans ttc-4. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG02451
    Corresponding_CDS_history: CBG02451:bp258
    Corresponding_transcript: CBG02451.1
    Other_sequence (32)
  Method: Gene