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WormBase Tree Display for Gene: WBGene00033483

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Name Class

WBGene00033483SMapS_parentSequencecb25.fpc2888a2
IdentityVersion2
NameCGC_nameCbr-chn-1From_analysisInferred_from_orthology
Sequence_nameCBG12551
Molecular_nameCBG12551
CBG12551.1
CBP17626
Other_nameCBG_12551Accession_evidenceNDBHE600940
Public_nameCbr-chn-1
DB_infoDatabaseNDBlocus_tagCBG_12551
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:03WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-chn-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classchn
RNASeq_FPKMWBls:000000224.0992From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
33.3697From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
33.6319From_analysisRNASeq.briggsae.WBls:0000002.control_mean
43.4269From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
26.6067From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
29.9882From_analysisRNASeq.briggsae.WBls:0000002.control_median
31.8756From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000351.1937From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
62.4939From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
73.7942From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
42.6341From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
55.874From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000445.6869From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
51.7785From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
57.8702From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
47.5435From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
50.1298From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
52.0092From_analysisRNASeq.briggsae.WBls:0000004.control_mean
58.8157From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.375862From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
25.8565From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.97011From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
9.73416From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.5712From_analysisRNASeq.briggsae.WBls:0000027.control_median
11.8437From_analysisRNASeq.briggsae.WBls:0000027.control_mean
18.1723From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003517.3956From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.82055From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
24.7334From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
25.5102From_analysisRNASeq.briggsae.WBls:0000038.control_mean
27.6158From_analysisRNASeq.briggsae.WBls:0000038.control_median
30.4982From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
44.9886From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004126.2409From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
44.846From_analysisRNASeq.briggsae.WBls:0000041.control_mean
47.2973From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
49.7068From_analysisRNASeq.briggsae.WBls:0000041.control_median
52.1163From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
53.7294From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
32.9029From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
39.5072From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
41.9657From_analysisRNASeq.briggsae.WBls:0000041.control_mean
43.4022From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006322.1552From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
22.657From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
24.969From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
27.6521From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
28.7161From_analysisRNASeq.briggsae.WBls:0000063.control_mean
46.1474From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
24.6606From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
24.8148From_analysisRNASeq.briggsae.WBls:0000063.control_median
28.0402From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010126.2409From_analysisRNASeq.briggsae.total_over_all_stages.control_median
30.5873From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
27.6869From_analysisRNASeq.briggsae.total_over_all_stages.control_median
32.3159From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00136874
00136875
Ortholog (34)
ParalogWBGene00025351Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00025500Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027123Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035594Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00087869Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ubiquitin-protein transferase activity. Predicted to be involved in protein ubiquitination. Is an ortholog of C. elegans chn-1. In C. elegans, chn-1 is involved in several processes, including determination of adult lifespan; egg-laying behavior; and protein ubiquitination.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG12551
Corresponding_CDS_historyCBG12551:bp194
Corresponding_transcriptCBG12551.1
Other_sequence (26)
Experimental_infoExpr_patternExpr1060728
Microarray_resultsGPL8303_CB6_WBGene00033483_A
GPL8303_CB6_WBGene00033483_B
GPL14143_CBG12551_332-391_0.725_68_C
GPL14143_CBG12551_615-674_0.960_1_A
GPL14143_CBG12551_759-818_0.936_2_B
MethodGene