WormBase Tree Display for Gene: WBGene00027836

WBGene00027836 SMap: S_parent: Sequence: cb25.fpc0110
  Identity: Version: 1
    Name: Sequence_name: CBG05376
      Molecular_name: CBG05376
        CBG05376.1
        CBP15332
      Other_name: CBG_05376 Accession_evidence: NDB HE601369
      Public_name: CBG05376
    DB_info: Database: NDB locus_tag CBG_05376
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:57 WBPerson1971 Event: Imported: Initial conversion from brigace
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000002 1.60424 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        1.71224 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        1.95595 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        2.55138 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        2.02981 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        2.05381 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        2.34739 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 131.327 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        171.374 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        211.422 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        178.18 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        191.791 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 55.72 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        63.8452 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        71.9705 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        67.5154 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        68.3637 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        71.7147 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        74.898 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 0.437732 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
        0.444641 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
        0.490644 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
        0.506343 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
        0.600709 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
        0.756778 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
        0.761155 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
        0.925276 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
        1.27994 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
        1.50105 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
        1.51524 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
      WBls:0000027 0 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
            RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.008558 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.034232 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 0 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.02699 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        0.156827 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        0.191264 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        0.286663 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        0.451403 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 0.989743 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        4.84482 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        5.25469 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        5.59663 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        5.93858 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        7.19627 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        1.04258 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        3.23436 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        3.9427 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        4.24452 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
      WBls:0000063 0.048528 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.242641 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0.329479 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        1.73423 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 0.444641 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        17.1951 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.875449 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        24.0255 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00131270
      00131271
    Ortholog: WBGene00017135 Caenorhabditis elegans From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00017140 Caenorhabditis elegans From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00101229 Pristionchus pacificus From_analysis: OMA
      WBGene00073072 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00069314 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00069320 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00069313 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00069316 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00075582 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00073073 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00069317 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00071728 Caenorhabditis remanei From_analysis: OMA
            WormBase-Compara
      WBGene00148566 Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00139508 Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00148519 Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00209719 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00214623 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00210081 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      CSP26.g10391 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g10392 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g14539 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g14540 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g7502 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g15454 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g2090 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g22747 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g22748 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g22754 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g22755 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g23628 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g23629 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g23640 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g23641 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP39.g16727 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g4094 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g4095 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g4103 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g4104 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g4152 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g4153 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_IV.g13619 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_IV.g13620 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00210.g7120 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_00210.g7121 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_00242.g7779 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_00242.g7780 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_05455 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_05456 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_05458 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_09890 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_004261 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_004266 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_004267 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_004268 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_004269 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_004270 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_004271 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_004272 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_004273 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_004457 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g18673 Panagrellus redivivus From_analysis: WormBase-Compara
      WBGene00233716 Brugia malayi From_analysis: WormBase-Compara
      chrII_pilon.g4487 Caenorhabditis elegans From_analysis: WormBase-Compara
      chrII_pilon.g4488 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00065835 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00065836 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00069315 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00246745 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00092561 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096672 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00112861 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00271904 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00273241 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00274580 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00267708 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog: WBGene00027835 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00027872 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00023974 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00024801 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027063 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00035657 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00087396 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable RNA binding activity. Is an ortholog of C. elegans EEED8.12 and EEED8.4. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG05376
    Corresponding_CDS_history: CBG05376:bp194
    Corresponding_transcript: CBG05376.1
  Experimental_info: Expr_pattern: Expr1069983
    Microarray_results: GPL8303_CB6_WBGene00027835_C
      GPL8303_CB6_WBGene00027835_D
      GPL8303_CB6_WBGene00027835_E
      GPL8303_CB6_WBGene00027836_A
      GPL8303_CB6_WBGene00027836_B
      GPL8303_CB6_WBGene00027836_C
      GPL8303_CB6_WBGene00027836_D
      GPL8303_CB6_WBGene00027836_E
      GPL14143_CBG05375_455-514_0.895_18_A
  Method: Gene