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WormBase Tree Display for Gene: WBGene00087396

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Name Class

WBGene00087396SMapS_parentSequencecb25.fpc4079a
IdentityVersion1
NameSequence_nameCBG25982
Molecular_nameCBG25982
CBG25982.1
CBP25828
Other_nameCBG_25982Accession_evidenceNDBHE600963
Public_nameCBG25982
DB_infoDatabaseNDBlocus_tagCBG_25982
SpeciesCaenorhabditis briggsae
HistoryVersion_change123 Jul 2008 11:20:50WBPerson1847EventImportednGASP new gene
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000215.9718From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
18.9101From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
22.484From_analysisRNASeq.briggsae.WBls:0000002.control_mean
32.5702From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
22.7302From_analysisRNASeq.briggsae.WBls:0000002.control_median
23.5006From_analysisRNASeq.briggsae.WBls:0000002.control_mean
26.5503From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000342.7203From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
42.8297From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
42.939From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
43.1625From_analysisRNASeq.briggsae.WBls:0000003.control_mean
43.8281From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000419.6956From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
20.466From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
21.2363From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
23.1197From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
23.2358From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
23.673From_analysisRNASeq.briggsae.WBls:0000004.control_mean
31.0777From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.558573From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
12.5654From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.85497From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.99298From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.98488From_analysisRNASeq.briggsae.WBls:0000027.control_median
5.27344From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.1148From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000358.26465From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003817.8405From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
3.07756From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
7.0127From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
8.41232From_analysisRNASeq.briggsae.WBls:0000038.control_median
9.43567From_analysisRNASeq.briggsae.WBls:0000038.control_mean
9.81194From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004117.1614From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
37.9708From_analysisRNASeq.briggsae.WBls:0000041.control_mean
44.1406From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
44.5367From_analysisRNASeq.briggsae.WBls:0000041.control_median
44.9327From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
45.6485From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
23.2982From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
28.1301From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
33.8853From_analysisRNASeq.briggsae.WBls:0000041.control_mean
36.1353From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006317.2477From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
18.3261From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
20.4444From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
24.2931From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
24.5899From_analysisRNASeq.briggsae.WBls:0000063.control_mean
42.6383From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
20.8986From_analysisRNASeq.briggsae.WBls:0000063.control_median
21.3529From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
24.0504From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010117.8405From_analysisRNASeq.briggsae.total_over_all_stages.control_median
19.9462From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
20.07From_analysisRNASeq.briggsae.total_over_all_stages.control_median
21.1881From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00172723
00172724
Ortholog (34)
ParalogWBGene00023974Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024801Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027063Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027836Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027872Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035657Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity. Is an ortholog of C. elegans R05D3.8.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG25982
Corresponding_transcriptCBG25982.1
Other_sequenceCSC02277_1
FD517712.1
CBC00859_1
Experimental_infoExpr_patternExpr1068610
Microarray_resultsGPL14143_CBG25982_332-391_0.909_2_C
GPL14143_CBG25982_670-729_0.584_106_B
GPL14143_CBG25982_884-943_0.643_89_A
MethodGene