WormBase Tree Display for Gene: WBGene00030483

WBGene00030483 SMap: S_parent: Sequence: cb25.fpc2090
  Identity: Version: 2
    Name: CGC_name: Cbr-unc-95 From_analysis: Inferred_from_orthology
      Sequence_name: CBG08745
      Molecular_name: CBG08745
        CBG08745.1
        CBP16350
      Other_name: CBG_08745 Accession_evidence: NDB HE601079
      Public_name: Cbr-unc-95
    DB_info: Database: NDB locus_tag CBG_08745
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:00 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-unc-95
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    Allele: WBVar00010227
      WBVar00010232
      WBVar00010237
      WBVar00010222
    RNASeq_FPKM: WBls:0000002 41.9996 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        52.3559 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        54.6252 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        69.52 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        33.257 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        47.1777 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        49.2831 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 13.3328 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        1.5303 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        7.43155 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        7.44085 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        7.45945 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 63.0501 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        63.7607 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        64.4712 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        59.5063 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        63.0533 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        63.0536 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        65.1872 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 18.4376 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
        20.6863 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
        35.2472 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
        41.3279 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
        46.6696 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
        49.5111 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
        52.3438 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
        58.0179 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
        58.1096 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
        24.3486 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
        31.5347 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
        32.2628 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
      WBls:0000027 10.1831 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        29.5621 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        35.1092 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        65.5824 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        107.02 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        47.5723 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        53.0869 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 74.9063 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 28.4763 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        59.2862 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        61.4055 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        62.1829 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        62.9603 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        84.3025 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
      WBls:0000041 16.4768 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        17.3862 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        18.2956 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        21.6634 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        43.1185 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        8.76279 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        19.068 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        19.8404 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        25.0682 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        43.915 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 24.3159 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        26.2128 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        26.6056 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        32.6796 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        33.0034 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        55.2032 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        29.6426 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        34.2178 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        40.2896 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 40.4605 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        41.9996 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        42.4443 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        42.5591 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
    Ortholog: WBGene00006824 Caenorhabditis elegans From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00060870 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00094740 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00156752 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00123782 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      CBOVI.g12226 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g1588 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g5852 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g8300 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g13423 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g2644 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g1825 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g11060 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g20616 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g4677 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00320.g9137 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-95 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g19054 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00639.g13884 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_09156 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_001476 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12073 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g1443 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10006900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00227494 Brugia malayi From_analysis: WormBase-Compara
      chrI_pilon.g2907 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00236824 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00259779 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00289563 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00023690 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00027659 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00028234 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00029930 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00030186 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00033216 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00034847 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036200 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036585 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037272 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Zinc finger, LIM-type and LIM domain. Is an ortholog of C. elegans unc-95. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG08745
    Corresponding_CDS_history: CBG08745:bp194
    Corresponding_transcript: CBG08745.1
    Other_sequence: PTC01319_1
      JI480893.1
      Dviv_isotig16599
      FE909227.1
      SRC00824_1
      Tcir_isotig26465
      NB09702
      NBC09420_1
      PT00192
      Oden_isotig07400
      Oden_isotig07402
      FC810868.1
      Oden_isotig07399
      Dviv_isotig33001
      FC816319.1
      GR10479
      CBC04739_1
      CJC01521_1
      Acan_isotig11327
      GRC03711_1
      Dviv_isotig16598
      CBC11502_1
      JI169926.1
      RSC00424_1
      HCC07296_1
      GO249949.1
      ASC30688_1
      HC05555
      SR02052
      BMC03912_1
      Oden_isotig07401
      JK315252.1
  Experimental_info: Expr_pattern: Expr1065285
    Microarray_results: GPL8303_CB6_WBGene00030483_A
      GPL8303_CB6_WBGene00030483_B
      GPL14143_CBG08745_590-649_0.938_11_C
      GPL14143_CBG08745_948-1007_0.959_5_B
      GPL14143_CBG08745_992-1051_0.968_1_A
  Method: Gene