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WormBase Tree Display for Gene: WBGene00078737

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Name Class

WBGene00078737SMapS_parentSequenceCrem_Contig12
IdentityVersion2
NameCGC_nameCre-vab-7From_analysisInferred_from_orthology
Sequence_nameCRE04638
Molecular_nameCRE04638
CRE04638.1
RP48311
Public_nameCre-vab-7
SpeciesCaenorhabditis remanei
HistoryVersion_change103 Jul 2008 11:46:53WBPerson4055EventCreated
204 Jul 2008 11:06:47WBPerson4055Name_changeCGC_nameCre-vab-7
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classvab
RNASeq_FPKMWBls:00000042.52312From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
2.64741From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
2.7717From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:00000240.437132From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
0.56937From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
0.687053From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
0.69837From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
0.826357From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
10.0591From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
1.06927From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
1.0757From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
1.22282From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
1.25375From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
1.27201From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
1.30043From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
1.36051From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
1.50045From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
1.9008From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
1.90789From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
1.93323From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
2.02052From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
2.05843From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
2.17165From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
2.33813From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
2.42747From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
2.4656From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
2.55318From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
2.57564From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
2.65081From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
2.85533From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
2.8588From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
2.87963From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
2.92942From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
3.06363From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
3.07531From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
3.10817From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
3.14305From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
3.41128From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
3.43132From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
3.52238From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
3.67925From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
3.84111From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
3.87599From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
4.4692From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
4.58112From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
4.72171From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
4.81977From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
4.83629From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
5.11442From_analysisRNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
5.86005From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
6.06024From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
6.23019From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
6.86887From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
8.03146From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
WBls:00000270From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
3.00818From_analysisRNASeq.remanei.WBls:0000027.control_mean
3.3952From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
3.76682From_analysisRNASeq.remanei.WBls:0000027.control_median
4.13844From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
4.49908From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:00000381.38984From_analysisRNASeq.remanei.WBls:0000038.control_mean
1.4341From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
2.73542From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
WBls:00000410.423112From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
0.478106From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
0.569843From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
0.576805From_analysisRNASeq.remanei.WBls:0000041.control_median
0.583766From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
0.615925From_analysisRNASeq.remanei.WBls:0000041.control_mean
0.764077From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
0.876645From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:00000630.577639From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
0.65995From_analysisRNASeq.remanei.WBls:0000063.control_median
0.742262From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
1.00817From_analysisRNASeq.remanei.WBls:0000063.control_mean
1.55032From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
1.8837From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
1.94708From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
3.3807From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
WBls:00001010.753169From_analysisRNASeq.remanei.total_over_all_stages.control_median
1.3567From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00169702
OrthologWBGene00006873Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00154556Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00128485Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00037726Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00225401Brugia malayiFrom_analysisWormBase-Compara
WBGene00207922Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00245608Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00195124Pristionchus pacificusFrom_analysisWormBase-Compara
CBOVI.g4418Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g16077Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14472Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g18555Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g22576Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g11578Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g12201Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g16666Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g11797Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g22964Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00891.g14779Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-vab-7Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold628.g7269Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00519.g12380Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_11481Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_010380Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03684Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g9222Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30109700Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g8961Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00262989Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00285520Trichuris murisFrom_analysisWormBase-Compara
WBGene00297273Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00051555Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00052082Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00053033Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00055585Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00056317Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00058342Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00058452Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00060406Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00061483Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00062733Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00062879Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066624Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00067190Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00067219Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00068128Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00069038Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00069511Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00069801Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00070555Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00071615Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00072680Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00061701Caenorhabditis remaneiFrom_analysisGeneACeDB-Compara
WBGene00061891Caenorhabditis remaneiFrom_analysisGeneACeDB-Compara
WBGene00064079Caenorhabditis remaneiFrom_analysisGeneACeDB-Compara
WBGene00064082Caenorhabditis remaneiFrom_analysisGeneACeDB-Compara
WBGene00077364Caenorhabditis remaneiFrom_analysisGeneACeDB-Compara
WBGene00077368Caenorhabditis remaneiFrom_analysisGeneACeDB-Compara
WBGene00082999Caenorhabditis remaneiFrom_analysisGeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity. Is an ortholog of C. elegans vab-7. In C. elegans, vab-7 is involved in cell fate specification and negative regulation of transcription by RNA polymerase II.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE04638
Corresponding_transcriptCRE04638.1
Other_sequenceMH02429
MH08806
Acan_isotig12015
MHC09880_1
FG587342.1
JI224420.1
BM01416
MHC06441_1
Dviv_isotig34250
Oden_isotig25142
CBC09109_1
Experimental_infoExpr_patternExpr1094505
Microarray_resultsGPL14146_CRE04638_285-344_0.924_7_A
GPL14146_CRE04638_444-503_0.932_3_B
GPL14146_CRE04638_584-643_0.946_2_C
MethodGene