WormBase Tree Display for Gene: WBGene00118813

WBGene00118813 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 7
    Name: CGC_name: Ppa-lgc-49 From_analysis: Inferred_from_orthology
      Sequence_name: PPA29259
      Molecular_name: PPA29259
        PPA29259.1
        PP54915
      Other_name: GENEPREDICTION_SNAP300000086048
        UMM-S278-10.44 Person_evidence: WBPerson606
      Public_name: Ppa-lgc-49
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:07 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Removed
        3 08 Feb 2019 15:42:26 WBPerson1983 Name_change: CGC_name: Ppa-lgc-49
        4 08 May 2019 10:09:28 WBPerson1983 Name_change: CGC_name: Removed
        5 01 Oct 2019 10:47:49 WBPerson1983 Name_change: CGC_name: Ppa-lgc-49
        6 04 Feb 2020 15:43:57 WBPerson1983 Name_change: CGC_name: Removed
        7 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Ppa-lgc-49
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lgc
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
            RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00186485
      00186486
      00186487
      00186488
      00186489
      00186490
    Ortholog: WBGene00008280 Caenorhabditis elegans From_analysis: OMA
      WBGene00010741 Caenorhabditis elegans From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00040442 Caenorhabditis briggsae From_analysis: OMA
      WBGene00041542 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00063881 Caenorhabditis remanei From_analysis: OMA
      WBGene00072429 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00136871 Caenorhabditis japonica From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00190110 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00024359 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00229318 Brugia malayi From_analysis: WormBase-Compara
      WBGene00243247 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g1692 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g15117 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g10838 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g16319 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g4714 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g18258 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g25442 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g10348 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g2119 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g1685 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g18806 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g3527 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-lgc-49 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold519.g2785 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00249.g7945 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_03221.g29472 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_05096.g34370 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_16501 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_016655 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g09991 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g12484 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g22107 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50315000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g15710 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00256013 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00294809 Trichuris muris From_analysis: WormBase-Compara
      WBGene00295094 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00089598 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00089887 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00090048 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00090088 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00090600 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00091469 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00091715 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00091902 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00092293 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00092487 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00092568 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00092927 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00092981 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00093398 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00093507 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00093530 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00093792 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00094886 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00095232 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00095523 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00095561 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00095792 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096180 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096314 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096447 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096737 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00097397 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00097528 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00099077 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00099079 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00099222 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00099957 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00100028 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00100131 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00100149 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00100788 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00101220 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00101436 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00101775 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00102150 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00102369 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00102482 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00103120 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00103670 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00104997 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00105130 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00105387 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00105475 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00105945 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00106281 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00106447 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00106840 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00106841 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107167 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107421 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107500 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107864 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107918 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107966 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00108006 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00108106 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00108406 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00109103 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00109238 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00109439 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00109732 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00110178 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00110305 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00110842 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00111295 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00111807 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00112012 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00113091 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00113305 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00113472 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00113693 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00114106 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00114665 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00114769 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00115250 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00115506 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00115536 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116165 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116273 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116652 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116671 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116699 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00117414 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00118382 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00119089 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00119191 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00204046 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00272915 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00272918 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00273181 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00273506 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00274031 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00274324 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00274759 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276039 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276047 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276280 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277073 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277528 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277591 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277660 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278203 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278589 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279258 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279699 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279750 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279938 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280196 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280443 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280697 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00284058 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00304838 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00305088 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00305140 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00305149 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans lgc-49. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA29259
    Corresponding_transcript: PPA29259.1
    Other_sequence: TX00066
      Oden_isotig23906
      Tcol_isotig13811
      GRC01352_1
      Acan_isotig15084
      Tcol_isotig05702
      TCC01078_1
      GRC01435_1
      Dviv_isotig28764
      GR12928
      ACC05021_1
      Tcol_isotig05703
      JO469018.1
      JI171060.1
      Tcol_isotig05705
      GR12451
      Oden_isotig24235
      Tcol_isotig05704
      JI224187.1
      Acan_isotig11861
  Experimental_info: Microarray_results: GPL14372_Probes_40929
      GPL14372_Probes_40931
  Remark: [180319 gw3] The CGC name Ppa-lgc-49 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson4025
    [190507 pad] The CGC name Ppa-lgc-49 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [200204 pad] The CGC name Ppa-lgc-49 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene