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WormBase Tree Display for Gene: WBGene00027123

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Name Class

WBGene00027123SMapS_parentSequencecb25.fpc0081
IdentityVersion2
NameCGC_nameCbr-sti-1From_analysisInferred_from_orthology
Sequence_nameCBG04457
Molecular_nameCBG04457
CBG04457.1
CBP06756
Other_nameCBG_04457Accession_evidenceNDBHE601251
Public_nameCbr-sti-1
DB_infoDatabaseNDBlocus_tagCBG_04457
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:56WBPerson1971EventImportedInitial conversion from brigace
224 Jun 2009 12:00:14WBPerson9133Name_changeCGC_nameCbr-sti-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsti
RNASeq_FPKMWBls:0000002136.909From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
138.859From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
172.493From_analysisRNASeq.briggsae.WBls:0000002.control_mean
241.711From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
125.794From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
137.884From_analysisRNASeq.briggsae.WBls:0000002.control_median
160.818From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:0000003165.356From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
166.214From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
167.071From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
173.036From_analysisRNASeq.briggsae.WBls:0000003.control_mean
186.682From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004122.295From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
127.945From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
133.594From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
136.417From_analysisRNASeq.briggsae.WBls:0000004.control_mean
139.951From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
141.326From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
144.919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002716.3235From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
193.822From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
47.9597From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
86.0351From_analysisRNASeq.briggsae.WBls:0000027.control_mean
101.761From_analysisRNASeq.briggsae.WBls:0000027.control_mean
148.938From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
98.4489From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:000003590.4271From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038103.114From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
139.25From_analysisRNASeq.briggsae.WBls:0000038.control_mean
140.773From_analysisRNASeq.briggsae.WBls:0000038.control_median
178.433From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
182.621From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
92.8306From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:0000041180.991From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
193.194From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
198.388From_analysisRNASeq.briggsae.WBls:0000041.control_mean
199.329From_analysisRNASeq.briggsae.WBls:0000041.control_median
205.465From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
213.902From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
201.655From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
202.91From_analysisRNASeq.briggsae.WBls:0000041.control_mean
203.56From_analysisRNASeq.briggsae.WBls:0000041.control_median
222.254From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:0000063119.931From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
134.573From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
145.384From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
146.658From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
163.472From_analysisRNASeq.briggsae.WBls:0000063.control_mean
270.814From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
122.302From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
139.979From_analysisRNASeq.briggsae.WBls:0000063.control_median
156.61From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:0000101145.384From_analysisRNASeq.briggsae.total_over_all_stages.control_median
149.734From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
145.152From_analysisRNASeq.briggsae.total_over_all_stages.control_median
152.003From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Contained_in_operonCBOPA0645
Ortholog (31)
ParalogWBGene00025351Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00025500Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033483Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035594Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00087869Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Heat shock chaperonin-binding; Tetratricopeptide repeat; Tetratricopeptide repeat 2; TPR repeat; STI1 domain; and Tetratricopeptide-like helical domain superfamily. Is an ortholog of C. elegans sti-1. In C. elegans, sti-1 is involved in determination of adult lifespan; reproduction; and response to heat.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG04457
Corresponding_CDS_historyCBG04457:bp194
Corresponding_transcriptCBG04457.1
Other_sequence (121)
Experimental_infoExpr_patternExpr1057886
Microarray_resultsGPL8303_CB6_WBGene00027123_A
GPL8303_CB6_WBGene00027123_B
GPL14143_CBG04457_68-127_0.898_18_B
GPL14143_CBG04457_256-315_0.877_32_C
GPL14143_CBG04457_469-528_0.911_12_A
Expression_clusterWBPaper00058955:heatshock_upregulated_CBG
MethodGene