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WormBase Tree Display for Gene: WBGene00028880

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Name Class

WBGene00028880SMapS_parentSequencecb25.fpc0156
IdentityVersion2
NameCGC_nameCbr-egl-2From_analysisInferred_from_orthology
Sequence_nameCBG06635
Molecular_nameCBG06635a
CBG06635a.1
CBP39011
CBG06635b
CBP45855
CBG06635b.1
Other_nameCBG_06635Accession_evidenceNDBHE601320
Public_nameCbr-egl-2
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-egl-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classegl
RNASeq_FPKMWBls:00000022.29768From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.80718From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.95033From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.17353From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.790313From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
2.30296From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.62401From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.52348From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.04696From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.609078From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.780273From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000045.02396From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
5.27697From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
5.52998From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
4.96523From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
5.22279From_analysisRNASeq.briggsae.WBls:0000004.control_mean
5.27474From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
5.32002From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.540806From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
10.1556From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.33655From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.01098From_analysisRNASeq.briggsae.WBls:0000027.control_mean
10.5247From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
5.63941From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.74608From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:00000354.93401From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.894178From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.86516From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
3.3529From_analysisRNASeq.briggsae.WBls:0000038.control_mean
3.6286From_analysisRNASeq.briggsae.WBls:0000038.control_median
4.39203From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
5.26022From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.447669From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.493241From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.528923From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.564605From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1.17029From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.17565From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.0749From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.449From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.5852From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
2.42764From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.318298From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.404846From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.56798From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.618666From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.419242From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.486413From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.923962From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001012.29768From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.07752From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.36266From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.20632From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00132343
00132344
00132345
00132346
00132347
00132348
Ortholog (26)
ParalogWBGene00029133Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032686Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033375Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036641Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039233Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041056Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00045213Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable voltage-gated potassium channel activity. Predicted to be involved in potassium ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans egl-2. In C. elegans, egl-2 is involved in chemosensory behavior; egg-laying behavior; and muscle contraction.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG06635a
CBG06635b
Corresponding_CDS_historyCBG06635:bp255
Corresponding_transcriptCBG06635a.1
CBG06635b.1
Other_sequenceHG09527
JI182523.1
HGC05587_1
Oden_isotig23027
JI215500.1
SRC00461_1
SR01532
JI479248.1
JI218900.1
Experimental_infoExpr_patternExpr1069500
Microarray_resultsGPL8303_CB6_WBGene00028880_A
GPL8303_CB6_WBGene00028880_B
GPL14143_CBG06635_1957-2016_0.864_40_B
GPL14143_CBG06635_2034-2093_0.893_21_A
GPL14143_CBG06635_2517-2576_0.929_4_C
MethodGene