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WormBase Tree Display for Gene: WBGene00032686

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Name Class

WBGene00032686SMapS_parentSequencecb25.fpc2501a
IdentityVersion2
NameCGC_nameCbr-cng-1From_analysisInferred_from_orthology
Sequence_nameCBG11583
Molecular_nameCBG11583
CBG11583.1
CBP22565
Other_nameCBG_11583Accession_evidenceNDBHE600985
Public_nameCbr-cng-1
DB_infoDatabaseNDBlocus_tagCBG_11583
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:02WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-cng-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcng
RNASeq_FPKMWBls:00000020.03433From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.092877From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.169056From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.379962From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.108459From_analysisRNASeq.briggsae.WBls:0000002.control_median
0.124041From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.157802From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.326201From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
0.383543From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.440885From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0.255695From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.235251From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.397935From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.560619From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.468292From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.470362From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.538904From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.548745From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.185594From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.556782From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.210869From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.24463From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.421738From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.148736From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.100704From_analysisRNASeq.briggsae.WBls:0000038.control_mean
0.128056From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.131404From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.134751From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
0.140008From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000410.070258From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.074873From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.076567From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.07826From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.122933From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.268342From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.173301From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.252183From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.472183From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
0.549184From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630From_analysisRNASeq.briggsae.WBls:0000063.control_mean
RNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.005318From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.031907From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.128056From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.189152From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.137379From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.227379From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (27)
ParalogWBGene00028880Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00029133Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033375Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036641Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039233Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041056Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00045213Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Cyclic nucleotide-binding domain; Cyclic nucleotide-binding-like; and RmlC-like jelly roll fold. Is an ortholog of C. elegans cng-1. In C. elegans, cng-1 is involved in negative regulation of cGMP-mediated signaling; response to oxygen levels; and sensory perception.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG11583
Corresponding_CDS_historyCBG11583:bp194
CBG11583:bp255
Corresponding_transcriptCBG11583.1
Other_sequenceHBC16564_1
EX916571.1
Dviv_isotig35275
Experimental_infoExpr_patternExpr1067932
Microarray_resultsGPL8303_CB6_WBGene00032686_A
GPL8303_CB6_WBGene00032686_B
GPL14143_CBG11583_1493-1552_0.881_12_A
GPL14143_CBG11583_1584-1643_0.815_57_B
GPL14143_CBG11583_1674-1733_0.939_1_C
MethodGene