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WormBase Tree Display for Gene: WBGene00040890

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Name Class

WBGene00040890SMapS_parentSequencecb25.fpc4321
IdentityVersion2
NameCGC_nameCbr-unc-57From_analysisInferred_from_orthology
Sequence_nameCBG22292
Molecular_nameCBG22292a
CBG22292a.1
CBP33757
CBG22292b
CBP40402
CBG22292b.1
Other_nameCBG_22292Accession_evidenceNDBHE601428
Public_nameCbr-unc-57
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:10WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-unc-57
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKM (10)
GO_annotation00144251
OrthologWBGene00006791Caenorhabditis elegansFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00060431Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00163512Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00117351Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00125860Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
CBOVI.g9341Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g7630Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g2682Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g14792Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g6658Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g499Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2984Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g22075Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g17236Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g21108Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00351.g9604Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_I.g750Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g8509Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00461.g11673Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_14743Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_001237Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05701Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g06261Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08154Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g16569Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10308110Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00225806Brugia malayiFrom_analysisWormBase-Compara
chrI_pilon.g754Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00237374Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00259642Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00029081Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034840Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040942Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in cytoplasm. Is an ortholog of C. elegans unc-57. In C. elegans, unc-57 is involved in clathrin-dependent endocytosis and necroptotic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG22292a
CBG22292b
Corresponding_CDS_historyCBG22292:bp194
Corresponding_transcriptCBG22292a.1
CBG22292b.1
Other_sequence (55)
Experimental_infoExpr_patternExpr1060921
Microarray_resultsGPL8303_CB6_WBGene00040890_A
GPL8303_CB6_WBGene00040890_B
GPL8303_CB6_WBGene00040890_C
GPL14143_CBG22292_704-763_0.785_69_C
GPL14143_CBG22292_976-1035_0.952_2_B
GPL14143_CBG22292_993-1052_0.948_3_A
MethodGene