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WormBase Tree Display for Gene: WBGene00027836

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Name Class

WBGene00027836SMapS_parentSequencecb25.fpc0110
IdentityVersion1
NameSequence_nameCBG05376
Molecular_nameCBG05376
CBG05376.1
CBP15332
Other_nameCBG_05376Accession_evidenceNDBHE601369
Public_nameCBG05376
DB_infoDatabaseNDBlocus_tagCBG_05376
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:57WBPerson1971EventImportedInitial conversion from brigace
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000021.60424From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.71224From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
1.95595From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.55138From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.02981From_analysisRNASeq.briggsae.WBls:0000002.control_median
2.05381From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.34739From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003131.327From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
171.374From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
211.422From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
178.18From_analysisRNASeq.briggsae.WBls:0000003.control_mean
191.791From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000455.72From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
63.8452From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
71.9705From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
67.5154From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
68.3637From_analysisRNASeq.briggsae.WBls:0000004.control_mean
71.7147From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
74.898From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270From_analysisRNASeq.briggsae.WBls:0000027.control_mean
RNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.008558From_analysisRNASeq.briggsae.WBls:0000027.control_mean
0.034232From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.02699From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
0.156827From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.191264From_analysisRNASeq.briggsae.WBls:0000038.control_mean
0.286663From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
0.451403From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:00000410.989743From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
4.84482From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.25469From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
5.59663From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.93858From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
7.19627From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.04258From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
3.23436From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
3.9427From_analysisRNASeq.briggsae.WBls:0000041.control_mean
4.24452From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000630.048528From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.242641From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.329479From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.73423From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.444641From_analysisRNASeq.briggsae.total_over_all_stages.control_median
17.1951From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.875449From_analysisRNASeq.briggsae.total_over_all_stages.control_median
24.0255From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00131270
00131271
Ortholog (75)
ParalogWBGene00027835Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00027872Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00023974Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00024801Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027063Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00035657Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00087396Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity. Is an ortholog of C. elegans EEED8.12 and EEED8.4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG05376
Corresponding_CDS_historyCBG05376:bp194
Corresponding_transcriptCBG05376.1
Experimental_infoExpr_patternExpr1069983
Microarray_resultsGPL8303_CB6_WBGene00027835_C
GPL8303_CB6_WBGene00027835_D
GPL8303_CB6_WBGene00027835_E
GPL8303_CB6_WBGene00027836_A
GPL8303_CB6_WBGene00027836_B
GPL8303_CB6_WBGene00027836_C
GPL8303_CB6_WBGene00027836_D
GPL8303_CB6_WBGene00027836_E
GPL14143_CBG05375_455-514_0.895_18_A
MethodGene