WormBase Tree Display for Gene: WBGene00113724

WBGene00113724 SMap: S_parent: Sequence: PPA_ChrIV
  Identity: Version: 3
    Name: CGC_name: Ppa-sorb-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA24170
      Molecular_name: PPA24170
        PPA24170.1
        PP70227
      Other_name: GENEPREDICTION_SNAP300000081059
        GENEPREDICTION_SNAP300000081060
        UMM-S2838-29.79 Person_evidence: WBPerson606
        Ppa-tag-208 From_analysis: Inferred_from_orthology
      Public_name: Ppa-sorb-1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:06 WBPerson4055 Event: Imported: from NGASP
        2 24 Nov 2017 09:46:51 WBPerson4055 Event: Acquires_merge: WBGene00113725
        3 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Ppa-sorb-1
                Other_name: Ppa-tag-208
      Acquires_merge: WBGene00113725
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sorb
    RNASeq_FPKM: WBls:0000032 4.26233 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 3.09859 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        4.26233 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        5.03345 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Ortholog: WBGene00012891 Caenorhabditis elegans From_analysis: OMA
            WormBase-Compara
      WBGene00072564 Caenorhabditis remanei From_analysis: Inparanoid_8
      WBGene00072565 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00072784 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00072786 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00080331 Caenorhabditis remanei From_analysis: Inparanoid_8
      WBGene00141216 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00148508 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00149939 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00040942 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00226832 Brugia malayi From_analysis: WormBase-Compara
      WBGene00241390 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g10777 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g14958 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g6075 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g7465 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP31.g9656 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP38.g10094 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g5908 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g21302 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g7783 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00130.g5167 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_IV.g12707 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g16375 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01504.g21322 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_013155 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02830 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g23208 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40268500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00075990 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00076857 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrIV_pilon.g12372 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00267341 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00297715 Trichuris muris From_analysis: WormBase-Compara
      WBGene00301337 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00091808 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107415 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00112952 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00117351 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: SH3-like domain superfamily; SH3 domain; PDZ domain 6; Variant SH3 domain; PDZ superfamily; and PDZ domain. Is an ortholog of C. elegans sorb-1. In C. elegans, sorb-1 is involved in maintenance of mitochondrion location and sarcomere organization. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA24170
    Corresponding_transcript: PPA24170.1
    Other_sequence (29)
  Experimental_info: Microarray_results: GPL14372_Probes_4636
      GPL14372_Probes_4637
      GPL14372_Probes_4638
      GPL14372_Probes_4639
      GPL14372_Probes_44542
      GPL14372_Probes_44543
      GPL14372_Probes_44545
      GPL14372_Probes_44546
  Method: Gene