WormBase Tree Display for Variation: WBVar00090811
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WBVar00090811 | Evidence | Paper_evidence | WBPaper00031335 | ||
---|---|---|---|---|---|
Name | Public_name | n4255 | |||
Other_name | C29E6.2b.1:c.1652-1639_1652-1429del | ||||
C29E6.2a.1:c.1655-1639_1655-1429del | |||||
HGVSg | CHROMOSOME_IV:g.11871612_11871822del | ||||
Sequence_details | SMap | S_parent | Sequence | C29E6 | |
Flanking_sequences | GTCGCTCATTGATTCACATCCATTTTGAG | GCCATGATGGGGCTCCCATTGAAT | |||
Mapping_target | C29E6 | ||||
Type_of_mutation | Deletion | ||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00027428 | ||||
WBStrain00034639 | |||||
WBStrain00040276 | |||||
Component_of_genotype | WBGenotype00000014 | ||||
Laboratory | MT | ||||
Status | Live | ||||
Affects | Gene | WBGene00195534 | |||
WBGene00003319 | |||||
WBGene00007801 | |||||
Transcript | C29E6.8 | VEP_consequence | transcript_ablation | ||
VEP_impact | HIGH | ||||
Exon_number | 1/1 | ||||
C29E6.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C29E6.2a.1:c.1655-1639_1655-1429del | ||||
Intron_number | 6/12 | ||||
C29E6.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C29E6.2b.1:c.1652-1639_1652-1429del | ||||
Intron_number | 6/12 | ||||
C29E6.7 | |||||
Interactor (46) | |||||
Isolation | Mutagen | UV-TMP | Paper_evidence | WBPaper00031335 | |
Genetics | Interpolated_map_position | IV | 5.35403 | ||
Description (2) | |||||
Disease_info | Models_disease | DOID:5688 | |||
Models_disease_in_annotation | WBDOannot00000257 | ||||
Reference | WBPaper00041652 | ||||
WBPaper00043908 | |||||
WBPaper00031335 | |||||
Method | Deletion_allele |